Analysis of interatomic Contacts of Structural Units in PDB entry:
5T8C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T8C entry

There is 1 chain in PDB entry 5T8C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 298THR 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5T8C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
298 301Right-handed 310
Helix 2
AA2
A
302 316Right-handed alpha
Helix 3
AA3
A
322 326Right-handed 310
Helix 4
AA4
A
329 338Right-handed alpha
Helix 5
AA5
A
344 349Right-handed 310
Helix 6
AA6
A
367 389Right-handed alpha
Helix 7
AA7
A
391 396Right-handed 310
Helix 8
AA8
A
398 410Right-handed alpha
Helix 9
AA9
A
421 436Right-handed alpha
Helix 10
AB1
A
443 463Right-handed alpha
Helix 11
AB2
A
463 468Right-handed alpha
Helix 12
AB3
A
474 484Right-handed alpha
Helix 13
AB4
A
494 508Right-handed alpha
Helix 14
AB5
A
509 511Right-handed 310
Helix 15
AB6
A
513 521Right-handed alpha
Helix 16
AB7
A
521 529Right-handed alpha
Helix 17
AB8
A
532 550Right-handed alpha
Helix 18
AB9
A
564 573Right-handed alpha
Helix 19
AC1
A
574 584Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5T8C.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 356first strand
Strand 2
A
359 362anti-parallel
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