Analysis of interatomic Contacts of Structural Units in PDB entry:
5T97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T97 entry

There are 2 chains in PDB entry 5T97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 310LEU 525
B
 SER 309TYR 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5T97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
311 323Right-handed alpha
Helix 2
AA2
A
344 364Right-handed alpha
Helix 3
AA3
A
371 395Right-handed alpha
Helix 4
AA4
A
421 438Right-handed alpha
Helix 5
AA5
A
441 456Right-handed alpha
Helix 6
AA6
A
475 494Right-handed alpha
Helix 7
AA7
A
496 525Right-handed alpha
Helix 8
AA8
B
311 322Right-handed alpha
Helix 9
AA9
B
344 363Right-handed alpha
Helix 10
AB1
B
371 381Right-handed alpha
Helix 11
AB2
B
382 395Right-handed alpha
Helix 12
AB3
B
396 398Right-handed 310
Helix 13
AB4
B
421 438Right-handed alpha
Helix 14
AB5
B
441 456Right-handed alpha
Helix 15
AB6
B
466 492Right-handed alpha
Helix 16
AB7
B
496 526Right-handed alpha
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There are 2 sheets in PDB entry 5T97. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 405first strand
Strand 2
A
408 410anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
402 405first strand
Strand 2
B
408 410anti-parallel
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