Analysis of interatomic Contacts of Structural Units in PDB entry:
5T9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T9C entry

There is 1 chain in PDB entry 5T9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ASN 31TYR 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5T9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
54 64Right-handed alpha
Helix 2
AA2
E
98 102Right-handed 310
Helix 3
AA3
E
103 108Right-handed alpha
Helix 4
AA4
E
113 120Right-handed alpha
Helix 5
AA5
E
121 124Right-handed 310
Helix 6
AA6
E
125 129Right-handed 310
Helix 7
AA7
E
135 144Right-handed alpha
Helix 8
AA8
E
145 147Right-handed 310
Helix 9
AA9
E
155 159Right-handed 310
Helix 10
AB1
E
161 173Right-handed alpha
Helix 11
AB2
E
191 202Right-handed alpha
Helix 12
AB3
E
212 218Right-handed alpha
Helix 13
AB4
E
220 229Right-handed alpha
Helix 14
AB5
E
238 241Right-handed 310
Helix 15
AB6
E
242 252Right-handed alpha
Helix 16
AB7
E
263 274Right-handed alpha
Helix 17
AB8
E
282 291Right-handed alpha
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There are 2 sheets in PDB entry 5T9C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 83first strand
Strand 2
E
68 75anti-parallel
Strand 3
E
149 153parallel
Strand 4
E
185 189parallel
Strand 5
E
207 211parallel
Strand 6
E
233 236parallel
Strand 7
E
255 256parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 83first strand
Strand 2
E
68 75anti-parallel
Strand 3
E
39 42parallel
Strand 4
E
277 280parallel
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