Analysis of interatomic Contacts of Structural Units in PDB entry:
5T9E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T9E entry

There are 2 chains in PDB entry 5T9E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9GLN 258
B
 SER 9GLN 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5T9E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 32Right-handed alpha
Helix 2
AA2
A
43 51Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
74 76Right-handed 310
Helix 5
AA5
A
77 85Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
103 114Right-handed alpha
Helix 8
AA8
A
150 163Right-handed alpha
Helix 9
AA9
A
172 182Right-handed alpha
Helix 10
AB1
A
183 198Right-handed alpha
Helix 11
AB2
A
206 220Right-handed alpha
Helix 12
AB3
A
223 233Right-handed alpha
Helix 13
AB4
A
236 258Right-handed alpha
Helix 14
AB5
B
18 31Right-handed alpha
Helix 15
AB6
B
43 51Right-handed alpha
Helix 16
AB7
B
57 62Right-handed alpha
Helix 17
AB8
B
77 84Right-handed alpha
Helix 18
AB9
B
86 90Right-handed 310
Helix 19
AC1
B
103 114Right-handed alpha
Helix 20
AC2
B
150 164Right-handed alpha
Helix 21
AC3
B
172 183Right-handed alpha
Helix 22
AC4
B
183 198Right-handed alpha
Helix 23
AC5
B
206 220Right-handed alpha
Helix 24
AC6
B
223 233Right-handed alpha
Helix 25
AC7
B
236 257Right-handed alpha
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There are 2 sheets in PDB entry 5T9E. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
34 38parallel
Strand 3
A
11 15parallel
Strand 4
A
68 71parallel
Strand 5
A
95 98parallel
Strand 6
A
119 125parallel
Strand 7
A
140 147anti-parallel
Strand 8
A
167 170parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
34 38parallel
Strand 3
B
11 15parallel
Strand 4
B
68 71parallel
Strand 5
B
95 98parallel
Strand 6
B
119 125parallel
Strand 7
B
140 147anti-parallel
Strand 8
B
167 170parallel
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