Analysis of interatomic Contacts of Structural Units in PDB entry:
5TE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TE8 entry

There are 3 chains in PDB entry 5TE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASP 497
B
 ALA 2ASP 497
C
 ALA 2VAL 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 5TE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 27Right-handed 310
Helix 2
AA2
A
31 37Right-handed alpha
Helix 3
AA3
A
49 55Right-handed 310
Helix 4
AA4
A
56 69Right-handed alpha
Helix 5
AA5
A
86 95Right-handed alpha
Helix 6
AA6
A
111 117Right-handed 310
Helix 7
AA7
A
122 134Right-handed alpha
Helix 8
AA8
A
135 137Right-handed 310
Helix 9
AA9
A
138 150Right-handed alpha
Helix 10
AB1
A
150 165Right-handed alpha
Helix 11
AB2
A
172 190Right-handed alpha
Helix 12
AB3
A
201 211Right-handed alpha
Helix 13
AB4
A
228 236Right-handed alpha
Helix 14
AB5
A
246 261Right-handed alpha
Helix 15
AB6
A
270 280Right-handed alpha
Helix 16
AB7
A
291 324Right-handed alpha
Helix 17
AB8
A
324 339Right-handed alpha
Helix 18
AB9
A
346 352Right-handed alpha
Helix 19
AC1
A
353 367Right-handed alpha
Helix 20
AC2
A
397 403Right-handed alpha
Helix 21
AC3
A
415 420Right-handed 310
Helix 22
AC4
A
444 462Right-handed alpha
Helix 23
AC5
B
2 27Right-handed 310
Helix 24
AC6
B
31 37Right-handed alpha
Helix 25
AC7
B
49 54Right-handed 310
Helix 26
AC8
B
55 69Right-handed alpha
Helix 27
AC9
B
86 95Right-handed alpha
Helix 28
AD1
B
111 117Right-handed 310
Helix 29
AD2
B
122 138Right-handed alpha
Helix 30
AD3
B
138 143Right-handed alpha
Helix 31
AD4
B
145 165Right-handed alpha
Helix 32
AD5
B
172 189Right-handed alpha
Helix 33
AD6
B
201 211Right-handed alpha
Helix 34
AD7
B
228 236Right-handed alpha
Helix 35
AD8
B
242 258Right-handed alpha
Helix 36
AD9
B
270 277Right-handed alpha
Helix 37
AE1
B
291 324Right-handed alpha
Helix 38
AE2
B
324 339Right-handed alpha
Helix 39
AE3
B
346 351Right-handed alpha
Helix 40
AE4
B
353 367Right-handed alpha
Helix 41
AE5
B
397 403Right-handed alpha
Helix 42
AE6
B
415 424Right-handed 310
Helix 43
AE7
B
444 462Right-handed alpha
Helix 44
AE8
C
23 27Right-handed 310
Helix 45
AE9
C
32 36Right-handed 310
Helix 46
AF1
C
49 55Right-handed 310
Helix 47
AF2
C
56 69Right-handed alpha
Helix 48
AF3
C
86 95Right-handed alpha
Helix 49
AF4
C
111 116Right-handed 310
Helix 50
AF5
C
122 134Right-handed alpha
Helix 51
AF6
C
135 137Right-handed 310
Helix 52
AF7
C
138 143Right-handed alpha
Helix 53
AF8
C
145 161Right-handed alpha
Helix 54
AF9
C
172 190Right-handed alpha
Helix 55
AG1
C
201 211Right-handed alpha
Helix 56
AG2
C
228 237Right-handed alpha
Helix 57
AG3
C
242 257Right-handed alpha
Helix 58
AG4
C
270 278Right-handed alpha
Helix 59
AG5
C
291 324Right-handed alpha
Helix 60
AG6
C
324 331Right-handed alpha
Helix 61
AG7
C
346 351Right-handed alpha
Helix 62
AG8
C
353 367Right-handed alpha
Helix 63
AG9
C
397 403Right-handed alpha
Helix 64
AH1
C
421 425Right-handed 310
Helix 65
AH2
C
444 461Right-handed alpha
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There are 9 sheets in PDB entry 5TE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
393 396parallel
Strand 4
A
373 376anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
490 495anti-parallel
Strand 3
A
463 466anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 383first strand
Strand 2
A
386 388anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 76first strand
Strand 2
B
79 84anti-parallel
Strand 3
B
393 396parallel
Strand 4
B
373 376anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
490 495anti-parallel
Strand 3
B
463 466anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 383first strand
Strand 2
B
386 388anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 76first strand
Strand 2
C
79 84anti-parallel
Strand 3
C
393 396parallel
Strand 4
C
373 376anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 171first strand
Strand 2
C
490 493anti-parallel
Strand 3
C
465 467anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
381 383first strand
Strand 2
C
386 388anti-parallel
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