Analysis of interatomic Contacts of Structural Units in PDB entry:
5TEB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TEB entry

There are 8 chains in PDB entry 5TEB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 89	ASP 254
B	ALA 89	ASP 254
C	ALA 89	ASP 254
D	ALA 89	ASP 254
E	ALA 89	ASP 254
F	ALA 89	ASP 254
G	LYS 90	ASP 254
H	ALA 89	ASP 187

There are 74 helices in PDB entry 5TEB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	103	Right-handed alpha
Helix 2	AA2	A	105	117	Right-handed alpha
Helix 3	AA3	A	133	143	Right-handed alpha
Helix 4	AA4	A	154	157	Right-handed 310
Helix 5	AA5	A	158	175	Right-handed alpha
Helix 6	AA6	A	187	194	Right-handed alpha
Helix 7	AA7	A	195	207	Right-handed alpha
Helix 8	AA8	A	210	227	Right-handed alpha
Helix 9	AA9	A	233	235	Right-handed 310
Helix 10	AB1	A	237	254	Right-handed alpha
Helix 11	AB2	B	98	103	Right-handed alpha
Helix 12	AB3	B	105	118	Right-handed alpha
Helix 13	AB4	B	133	143	Right-handed alpha
Helix 14	AB5	B	154	157	Right-handed 310
Helix 15	AB6	B	158	175	Right-handed alpha
Helix 16	AB7	B	187	194	Right-handed alpha
Helix 17	AB8	B	195	206	Right-handed alpha
Helix 18	AB9	B	210	225	Right-handed alpha
Helix 19	AC1	B	233	235	Right-handed 310
Helix 20	AC2	B	237	253	Right-handed alpha
Helix 21	AC3	C	100	105	Right-handed alpha
Helix 22	AC4	C	106	118	Right-handed alpha
Helix 23	AC5	C	134	143	Right-handed alpha
Helix 24	AC6	C	152	157	Right-handed alpha
Helix 25	AC7	C	158	176	Right-handed alpha
Helix 26	AC8	C	187	194	Right-handed alpha
Helix 27	AC9	C	195	206	Right-handed alpha
Helix 28	AD1	C	210	226	Right-handed alpha
Helix 29	AD2	C	237	253	Right-handed alpha
Helix 30	AD3	D	98	103	Right-handed alpha
Helix 31	AD4	D	105	118	Right-handed alpha
Helix 32	AD5	D	134	143	Right-handed alpha
Helix 33	AD6	D	154	157	Right-handed 310
Helix 34	AD7	D	158	176	Right-handed alpha
Helix 35	AD8	D	187	194	Right-handed alpha
Helix 36	AD9	D	195	206	Right-handed alpha
Helix 37	AE1	D	210	225	Right-handed alpha
Helix 38	AE2	D	233	235	Right-handed 310
Helix 39	AE3	D	237	254	Right-handed alpha
Helix 40	AE4	E	98	103	Right-handed alpha
Helix 41	AE5	E	105	117	Right-handed alpha
Helix 42	AE6	E	134	143	Right-handed alpha
Helix 43	AE7	E	154	157	Right-handed 310
Helix 44	AE8	E	158	176	Right-handed alpha
Helix 45	AE9	E	187	194	Right-handed alpha
Helix 46	AF1	E	195	207	Right-handed alpha
Helix 47	AF2	E	210	226	Right-handed alpha
Helix 48	AF3	E	233	235	Right-handed 310
Helix 49	AF4	E	237	252	Right-handed alpha
Helix 50	AF5	F	100	105	Right-handed alpha
Helix 51	AF6	F	106	117	Right-handed alpha
Helix 52	AF7	F	134	143	Right-handed alpha
Helix 53	AF8	F	158	175	Right-handed alpha
Helix 54	AF9	F	187	194	Right-handed alpha
Helix 55	AG1	F	195	207	Right-handed alpha
Helix 56	AG2	F	210	226	Right-handed alpha
Helix 57	AG3	F	237	254	Right-handed alpha
Helix 58	AG4	G	109	118	Right-handed alpha
Helix 59	AG5	G	134	144	Right-handed alpha
Helix 60	AG6	G	152	157	Right-handed alpha
Helix 61	AG7	G	158	175	Right-handed alpha
Helix 62	AG8	G	187	194	Right-handed alpha
Helix 63	AG9	G	195	202	Right-handed alpha
Helix 64	AH1	G	204	208	Right-handed 310
Helix 65	AH2	G	211	225	Right-handed alpha
Helix 66	AH3	G	237	253	Right-handed alpha
Helix 67	AH4	H	109	118	Right-handed alpha
Helix 68	AH5	H	134	143	Right-handed alpha
Helix 69	AH6	H	152	157	Right-handed alpha
Helix 70	AH7	H	158	175	Right-handed alpha
Helix 71	AH8	H	187	194	Right-handed alpha
Helix 72	AH9	H	195	206	Right-handed alpha
Helix 73	AI1	H	210	225	Right-handed alpha
Helix 74	AI2	H	237	253	Right-handed alpha

There are 8 sheets in PDB entry 5TEB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	96	first strand
Strand 2	A	144	151	parallel
Strand 3	A	178	183	parallel
Strand 4	A	230	231	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	96	first strand
Strand 2	B	144	151	parallel
Strand 3	B	178	183	parallel
Strand 4	B	230	231	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	96	first strand
Strand 2	C	144	151	parallel
Strand 3	C	178	184	parallel
Strand 4	C	230	232	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	96	first strand
Strand 2	D	144	151	parallel
Strand 3	D	178	183	parallel
Strand 4	D	229	231	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	96	first strand
Strand 2	E	144	152	parallel
Strand 3	E	178	184	parallel
Strand 4	E	230	231	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	96	first strand
Strand 2	F	144	151	parallel
Strand 3	F	178	184	parallel
Strand 4	F	230	232	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	96	first strand
Strand 2	G	146	151	parallel
Strand 3	G	178	184	parallel
Strand 4	G	230	232	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	91	96	first strand
Strand 2	H	144	151	parallel
Strand 3	H	178	184	parallel
Strand 4	H	230	232	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TEB

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TEB