Analysis of interatomic Contacts of Structural Units in PDB entry:
5TEC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TEC entry

There are 2 chains in PDB entry 5TEC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 10THR 175
B
 TYR 12THR 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 5TEC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 24Right-handed alpha
Helix 2
AA2
A
26 37Right-handed alpha
Helix 3
AA3
A
74 77Right-handed 310
Helix 4
AA4
A
78 96Right-handed alpha
Helix 5
AA5
A
107 114Right-handed alpha
Helix 6
AA6
A
115 127Right-handed alpha
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
153 155Right-handed 310
Helix 9
AA9
A
157 174Right-handed alpha
Helix 10
AB1
B
19 24Right-handed alpha
Helix 11
AB2
B
26 38Right-handed alpha
Helix 12
AB3
B
60 64Right-handed 310
Helix 13
AB4
B
74 77Right-handed 310
Helix 14
AB5
B
78 96Right-handed alpha
Helix 15
AB6
B
107 114Right-handed alpha
Helix 16
AB7
B
115 127Right-handed alpha
Helix 17
AB8
B
133 146Right-handed alpha
Helix 18
AB9
B
153 155Right-handed 310
Helix 19
AC1
B
157 174Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5TEC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 17first strand
Strand 2
A
64 71parallel
Strand 3
A
98 103parallel
Strand 4
A
150 151parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 17first strand
Strand 2
B
66 72parallel
Strand 3
B
98 104parallel
Strand 4
B
150 151parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il