Analysis of interatomic Contacts of Structural Units in PDB entry:
5TEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TEK entry

There are 2 chains in PDB entry 5TEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -3LEU 245
B
 SER 0HIS 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5TEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
39 45Right-handed alpha
Helix 3
AA3
A
55 69Right-handed alpha
Helix 4
AA4
A
81 95Right-handed alpha
Helix 5
AA5
A
107 121Right-handed alpha
Helix 6
AA6
A
122 124Right-handed 310
Helix 7
AA7
A
142 156Right-handed alpha
Helix 8
AA8
A
218 229Right-handed alpha
Helix 9
AA9
A
230 232Right-handed 310
Helix 10
AB1
A
239 244Right-handed alpha
Helix 11
AB2
B
11 24Right-handed alpha
Helix 12
AB3
B
39 45Right-handed alpha
Helix 13
AB4
B
55 69Right-handed alpha
Helix 14
AB5
B
81 94Right-handed alpha
Helix 15
AB6
B
107 121Right-handed alpha
Helix 16
AB7
B
122 124Right-handed 310
Helix 17
AB8
B
142 156Right-handed alpha
Helix 18
AB9
B
218 229Right-handed alpha
Helix 19
AC1
B
230 232Right-handed 310
Helix 20
AC2
B
239 244Right-handed alpha
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There are 3 sheets in PDB entry 5TEK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
2 7parallel
Strand 3
A
49 52parallel
Strand 4
A
72 75parallel
Strand 5
A
99 102parallel
Strand 6
A
234 237parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
181 187anti-parallel
Strand 3
A
126 133parallel
Strand 4
A
193 201anti-parallel
Strand 5
A
204 212anti-parallel
Strand 6
B
204 212anti-parallel
Strand 7
B
193 201anti-parallel
Strand 8
B
126 133anti-parallel
Strand 9
B
181 187parallel
Strand 10
B
176 178anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 33first strand
Strand 2
B
2 7parallel
Strand 3
B
49 52parallel
Strand 4
B
72 75parallel
Strand 5
B
99 102parallel
Strand 6
B
234 237parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il