Analysis of interatomic Contacts of Structural Units in PDB entry:
5THR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5THR entry

There are 21 chains in PDB entry 5THR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 520	ASP 664
B	GLY 521	ASP 664
C	GLY 521	ASP 664
D	ALA 31	VAL 505
E	ALA 31	VAL 505
F	ALA 31	VAL 505
G	LYS 1	PHE 98
H	LYS 1	PHE 98
I	LYS 1	VAL 97
J	ASP 1	ILE 108
K	ASP 1	ILE 108
L	ASP 1	ILE 108
M	GLU 1	SER 127
N	GLU 1	SER 127
O	GLU 1	SER 127
P	GLN 1	SER 131
Q	ASP 1	VAL 107
R	GLN 1	SER 131
S	ASP 1	VAL 107
T	GLN 1	SER 131
U	ASP 1	VAL 107

There are 30 helices in PDB entry 5THR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	531	543	Right-handed alpha
Helix 2	AA2	A	572	595	Right-handed alpha
Helix 3	AA3	A	619	623	Right-handed 310
Helix 4	AA4	A	628	661	Right-handed alpha
Helix 5	AA5	B	531	543	Right-handed alpha
Helix 6	AA6	B	572	595	Right-handed alpha
Helix 7	AA7	B	619	623	Right-handed 310
Helix 8	AA8	B	628	661	Right-handed alpha
Helix 9	AA9	C	531	543	Right-handed alpha
Helix 10	AB1	C	572	595	Right-handed alpha
Helix 11	AB2	C	619	623	Right-handed 310
Helix 12	AB3	C	628	661	Right-handed alpha
Helix 13	AB4	D	100	115	Right-handed alpha
Helix 14	AB5	D	335	353	Right-handed alpha
Helix 15	AB6	D	368	373	Right-handed alpha
Helix 16	AB7	D	474	483	Right-handed alpha
Helix 17	AB8	E	100	115	Right-handed alpha
Helix 18	AB9	E	335	353	Right-handed alpha
Helix 19	AC1	E	368	373	Right-handed alpha
Helix 20	AC2	E	474	483	Right-handed alpha
Helix 21	AC3	F	100	115	Right-handed alpha
Helix 22	AC4	F	335	353	Right-handed alpha
Helix 23	AC5	F	368	373	Right-handed alpha
Helix 24	AC6	F	474	483	Right-handed alpha
Helix 25	AC7	M	87	91	Right-handed 310
Helix 26	AC8	N	87	91	Right-handed 310
Helix 27	AC9	O	87	91	Right-handed 310
Helix 28	AD1	P	90	94	Right-handed 310
Helix 29	AD2	R	90	94	Right-handed 310
Helix 30	AD3	T	90	94	Right-handed 310

There are 72 sheets in PDB entry 5THR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4, AH5, AH6, AH7, AH8, AH9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	36	first strand
Strand 2	D	498	499	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	47	first strand
Strand 2	D	488	490	anti-parallel
Strand 3	D	224	228	anti-parallel
Strand 4	D	242	245	anti-parallel
Strand 5	D	83	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	216	218	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	93	first strand
Strand 2	D	237	239	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	125	first strand
Strand 2	D	197	202	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	272	first strand
Strand 2	D	284	287	anti-parallel
Strand 3	D	452	456	anti-parallel
Strand 4	D	465	469	anti-parallel
Strand 5	D	358	361	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	416	first strand
Strand 2	D	331	333	anti-parallel
Strand 3	D	292	296	anti-parallel
Strand 4	D	445	449	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	36	first strand
Strand 2	E	498	499	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	47	first strand
Strand 2	E	488	490	anti-parallel
Strand 3	E	224	228	anti-parallel
Strand 4	E	242	245	anti-parallel
Strand 5	E	83	86	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	55	first strand
Strand 2	E	216	218	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	93	first strand
Strand 2	E	237	239	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	125	first strand
Strand 2	E	197	202	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	271	272	first strand
Strand 2	E	284	287	anti-parallel
Strand 3	E	452	456	anti-parallel
Strand 4	E	465	469	anti-parallel
Strand 5	E	358	361	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	414	416	first strand
Strand 2	E	331	333	anti-parallel
Strand 3	E	292	296	anti-parallel
Strand 4	E	445	449	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	36	first strand
Strand 2	F	498	499	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	47	first strand
Strand 2	F	488	490	anti-parallel
Strand 3	F	224	228	anti-parallel
Strand 4	F	242	245	anti-parallel
Strand 5	F	83	86	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	55	first strand
Strand 2	F	216	218	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	93	first strand
Strand 2	F	237	239	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	125	first strand
Strand 2	F	197	202	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	271	272	first strand
Strand 2	F	284	287	anti-parallel
Strand 3	F	452	456	anti-parallel
Strand 4	F	465	469	anti-parallel
Strand 5	F	358	361	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	414	416	first strand
Strand 2	F	331	333	anti-parallel
Strand 3	F	292	296	anti-parallel
Strand 4	F	445	449	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	6	first strand
Strand 2	G	93	97	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	14	first strand
Strand 2	G	69	71	anti-parallel
Strand 3	G	55	56	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	45	first strand
Strand 2	G	35	39	anti-parallel
Strand 3	G	27	29	anti-parallel
Strand 4	G	83	85	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2	6	first strand
Strand 2	H	93	97	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	14	first strand
Strand 2	H	69	71	anti-parallel
Strand 3	H	55	56	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	35	39	anti-parallel
Strand 3	H	27	29	anti-parallel
Strand 4	H	83	85	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	2	5	first strand
Strand 2	I	93	96	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	12	14	first strand
Strand 2	I	69	71	anti-parallel
Strand 3	I	55	56	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	45	first strand
Strand 2	I	35	39	anti-parallel
Strand 3	I	27	29	anti-parallel
Strand 4	I	83	85	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	21	23	first strand
Strand 2	J	71	75	anti-parallel
Strand 3	J	62	65	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	44	49	first strand
Strand 2	J	33	38	anti-parallel
Strand 3	J	85	90	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	21	23	first strand
Strand 2	K	71	75	anti-parallel
Strand 3	K	62	65	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	49	first strand
Strand 2	K	33	38	anti-parallel
Strand 3	K	85	90	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	21	23	first strand
Strand 2	L	71	75	anti-parallel
Strand 3	L	62	65	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	44	49	first strand
Strand 2	L	33	38	anti-parallel
Strand 3	L	85	90	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	2	6	first strand
Strand 2	M	22	26	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	122	126	parallel
Strand 3	M	92	97	anti-parallel
Strand 4	M	33	37	anti-parallel
Strand 5	M	47	52	anti-parallel
Strand 6	M	57	58	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	18	20	first strand
Strand 2	M	78	83	anti-parallel
Strand 3	M	68	73	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2	6	first strand
Strand 2	N	22	26	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	11	12	first strand
Strand 2	N	122	126	parallel
Strand 3	N	92	97	anti-parallel
Strand 4	N	33	37	anti-parallel
Strand 5	N	47	52	anti-parallel
Strand 6	N	57	58	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	18	20	first strand
Strand 2	N	78	83	anti-parallel
Strand 3	N	68	73	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	2	6	first strand
Strand 2	O	22	26	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	11	12	first strand
Strand 2	O	122	126	parallel
Strand 3	O	92	97	anti-parallel
Strand 4	O	33	37	anti-parallel
Strand 5	O	47	52	anti-parallel
Strand 6	O	57	58	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	18	20	first strand
Strand 2	O	78	83	anti-parallel
Strand 3	O	68	73	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	4	6	first strand
Strand 2	P	22	24	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	18	20	first strand
Strand 2	P	84	86	anti-parallel
Strand 3	P	67	68	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	36	40	first strand
Strand 2	P	46	51	anti-parallel
Strand 3	P	58	59	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	71	72	first strand
Strand 2	P	81	82	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	95	97	first strand
Strand 2	P	126	128	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	112	113	first strand
Strand 2	P	116	117	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	5	7	first strand
Strand 2	Q	19	24	anti-parallel
Strand 3	Q	71	76	anti-parallel
Strand 4	Q	66	68	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	12	first strand
Strand 2	Q	103	106	parallel
Strand 3	Q	86	87	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	34	36	first strand
Strand 2	Q	89	91	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	4	6	first strand
Strand 2	R	22	24	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	18	20	first strand
Strand 2	R	84	86	anti-parallel
Strand 3	R	67	68	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	36	40	first strand
Strand 2	R	46	51	anti-parallel
Strand 3	R	58	59	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	71	72	first strand
Strand 2	R	81	82	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	95	97	first strand
Strand 2	R	126	128	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	112	113	first strand
Strand 2	R	116	117	anti-parallel

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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	7	first strand
Strand 2	S	19	24	anti-parallel
Strand 3	S	71	76	anti-parallel
Strand 4	S	66	68	anti-parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	10	12	first strand
Strand 2	S	103	106	parallel
Strand 3	S	86	87	anti-parallel

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There are 2 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	34	36	first strand
Strand 2	S	89	91	anti-parallel

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There are 2 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	4	6	first strand
Strand 2	T	22	24	anti-parallel

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There are 3 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	18	20	first strand
Strand 2	T	84	86	anti-parallel
Strand 3	T	67	68	anti-parallel

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There are 3 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	36	40	first strand
Strand 2	T	46	51	anti-parallel
Strand 3	T	58	59	anti-parallel

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There are 2 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	71	72	first strand
Strand 2	T	81	82	anti-parallel

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There are 2 strands in AH5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	95	97	first strand
Strand 2	T	126	128	anti-parallel

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There are 2 strands in AH6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	112	113	first strand
Strand 2	T	116	117	anti-parallel

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There are 4 strands in AH7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	5	7	first strand
Strand 2	U	19	24	anti-parallel
Strand 3	U	71	76	anti-parallel
Strand 4	U	66	68	anti-parallel

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There are 3 strands in AH8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	10	12	first strand
Strand 2	U	103	106	parallel
Strand 3	U	86	87	anti-parallel

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There are 2 strands in AH9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	34	36	first strand
Strand 2	U	89	91	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 5THR

Analysis of interatomic Contacts of Structural Units in PDB entry:
5THR