Analysis of interatomic Contacts of Structural Units in PDB entry:
5TJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TJX entry

There is 1 chain in PDB entry 5TJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 391GLN 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5TJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
432 437Right-handed 310
Helix 2
AA2
A
453 457Right-handed 310
Helix 3
AA3
A
544 552Right-handed alpha
Helix 4
AA4
A
617 626Right-handed alpha
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There are 2 sheets in PDB entry 5TJX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
536 539anti-parallel
Strand 3
A
517 521anti-parallel
Strand 4
A
581 586anti-parallel
Strand 5
A
589 598anti-parallel
Strand 6
A
609 613anti-parallel
Strand 7
A
561 564anti-parallel
Strand 8
A
542 543anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 448first strand
Strand 2
A
405 411anti-parallel
Strand 3
A
415 425anti-parallel
Strand 4
A
428 431anti-parallel
Strand 5
A
485 489anti-parallel
Strand 6
A
466 471anti-parallel
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