Analysis of interatomic Contacts of Structural Units in PDB entry:
5TKB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TKB entry

There are 4 chains in PDB entry 5TKB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 250GLN 578
B
 GLU 253GLN 578
C
 THR 252GLN 578
D
 GLN 254GLN 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 5TKB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
252 262Right-handed alpha
Helix 2
AA2
A
263 265Right-handed 310
Helix 3
AA3
A
271 279Right-handed alpha
Helix 4
AA4
A
282 295Right-handed alpha
Helix 5
AA5
A
296 301Right-handed alpha
Helix 6
AA6
A
304 318Right-handed alpha
Helix 7
AA7
A
327 343Right-handed alpha
Helix 8
AA8
A
344 348Right-handed 310
Helix 9
AA9
A
352 366Right-handed alpha
Helix 10
AB1
A
374 381Right-handed alpha
Helix 11
AB2
A
383 389Right-handed alpha
Helix 12
AB3
A
393 406Right-handed alpha
Helix 13
AB4
A
407 409Right-handed 310
Helix 14
AB5
A
419 436Right-handed alpha
Helix 15
AB6
A
437 440Right-handed 310
Helix 16
AB7
A
441 455Right-handed alpha
Helix 17
AB8
A
468 485Right-handed alpha
Helix 18
AB9
A
486 490Right-handed 310
Helix 19
AC1
A
491 516Right-handed alpha
Helix 20
AC2
A
530 542Right-handed alpha
Helix 21
AC3
A
542 554Right-handed alpha
Helix 22
AC4
A
558 576Right-handed alpha
Helix 23
AC5
B
254 263Right-handed alpha
Helix 24
AC6
B
271 279Right-handed alpha
Helix 25
AC7
B
282 295Right-handed alpha
Helix 26
AC8
B
296 301Right-handed alpha
Helix 27
AC9
B
304 318Right-handed alpha
Helix 28
AD1
B
327 343Right-handed alpha
Helix 29
AD2
B
344 348Right-handed 310
Helix 30
AD3
B
352 366Right-handed alpha
Helix 31
AD4
B
374 381Right-handed alpha
Helix 32
AD5
B
383 389Right-handed alpha
Helix 33
AD6
B
393 406Right-handed alpha
Helix 34
AD7
B
407 409Right-handed 310
Helix 35
AD8
B
419 436Right-handed alpha
Helix 36
AD9
B
437 440Right-handed 310
Helix 37
AE1
B
441 453Right-handed alpha
Helix 38
AE2
B
468 485Right-handed alpha
Helix 39
AE3
B
486 490Right-handed 310
Helix 40
AE4
B
491 516Right-handed alpha
Helix 41
AE5
B
530 542Right-handed alpha
Helix 42
AE6
B
542 554Right-handed alpha
Helix 43
AE7
B
558 574Right-handed alpha
Helix 44
AE8
C
253 263Right-handed alpha
Helix 45
AE9
C
271 279Right-handed alpha
Helix 46
AF1
C
282 295Right-handed alpha
Helix 47
AF2
C
296 301Right-handed alpha
Helix 48
AF3
C
304 318Right-handed alpha
Helix 49
AF4
C
327 343Right-handed alpha
Helix 50
AF5
C
344 348Right-handed 310
Helix 51
AF6
C
352 366Right-handed alpha
Helix 52
AF7
C
374 381Right-handed alpha
Helix 53
AF8
C
383 389Right-handed alpha
Helix 54
AF9
C
393 406Right-handed alpha
Helix 55
AG1
C
407 409Right-handed 310
Helix 56
AG2
C
419 436Right-handed alpha
Helix 57
AG3
C
437 440Right-handed 310
Helix 58
AG4
C
441 455Right-handed alpha
Helix 59
AG5
C
468 485Right-handed alpha
Helix 60
AG6
C
486 490Right-handed 310
Helix 61
AG7
C
491 516Right-handed alpha
Helix 62
AG8
C
530 542Right-handed alpha
Helix 63
AG9
C
542 554Right-handed alpha
Helix 64
AH1
C
558 575Right-handed alpha
Helix 65
AH2
D
255 262Right-handed alpha
Helix 66
AH3
D
263 265Right-handed 310
Helix 67
AH4
D
271 279Right-handed alpha
Helix 68
AH5
D
282 295Right-handed alpha
Helix 69
AH6
D
296 301Right-handed alpha
Helix 70
AH7
D
304 318Right-handed alpha
Helix 71
AH8
D
327 343Right-handed alpha
Helix 72
AH9
D
344 348Right-handed 310
Helix 73
AI1
D
352 366Right-handed alpha
Helix 74
AI2
D
374 381Right-handed alpha
Helix 75
AI3
D
383 389Right-handed alpha
Helix 76
AI4
D
393 406Right-handed alpha
Helix 77
AI5
D
407 409Right-handed 310
Helix 78
AI6
D
419 436Right-handed alpha
Helix 79
AI7
D
437 440Right-handed 310
Helix 80
AI8
D
441 455Right-handed alpha
Helix 81
AI9
D
468 485Right-handed alpha
Helix 82
AJ1
D
486 490Right-handed 310
Helix 83
AJ2
D
491 516Right-handed alpha
Helix 84
AJ3
D
530 542Right-handed alpha
Helix 85
AJ4
D
542 554Right-handed alpha
Helix 86
AJ5
D
558 574Right-handed alpha
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There are no sheets in PDB entry 5TKB
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