Analysis of interatomic Contacts of Structural Units in PDB entry:
5TQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TQ0 entry

There are 4 chains in PDB entry 5TQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 24ARG 414
B
LEU 34ALA 388
H
GLU 1PRO 218
L
ASP 1ASN 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5TQ0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 52Right-handed alpha
Helix 2
AA2
A
70 82Right-handed alpha
Helix 3
AA3
A
83 85Right-handed 310
Helix 4
AA4
A
104 114Right-handed alpha
Helix 5
AA5
A
125 130Right-handed 310
Helix 6
AA6
A
143 146Right-handed 310
Helix 7
AA7
A
147 158Right-handed alpha
Helix 8
AA8
A
170 186Right-handed alpha
Helix 9
AA9
A
225 235Right-handed alpha
Helix 10
AB1
A
245 259Right-handed alpha
Helix 11
AB2
A
272 276Right-handed 310
Helix 12
AB3
A
277 283Right-handed alpha
Helix 13
AB4
A
297 317Right-handed alpha
Helix 14
AB5
A
338 348Right-handed alpha
Helix 15
AB6
B
78 92Right-handed alpha
Helix 16
AB7
B
107 121Right-handed alpha
Helix 17
AB8
B
129 133Right-handed 310
Helix 18
AB9
B
150 165Right-handed alpha
Helix 19
AC1
B
179 194Right-handed alpha
Helix 20
AC2
B
212 220Right-handed alpha
Helix 21
AC3
B
232 246Right-handed alpha
Helix 22
AC4
B
258 263Right-handed alpha
Helix 23
AC5
B
287 310Right-handed alpha
Helix 24
AC6
H
62 65Right-handed 310
Helix 25
AC7
H
87 91Right-handed 310
Helix 26
AC8
L
79 83Right-handed 310
Helix 27
AC9
L
182 187Right-handed alpha
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There are 19 sheets in PDB entry 5TQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 66first strand
Strand 2
A
25 33parallel
Strand 3
A
87 92parallel
Strand 4
A
118 120parallel
Strand 5
A
137 139parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
213 218first strand
Strand 2
A
163 168parallel
Strand 3
A
239 243parallel
Strand 4
A
267 270parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
288 292first strand
Strand 2
A
372 378anti-parallel
Strand 3
A
381 388anti-parallel
Strand 4
A
393 394anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
350 351first strand
Strand 2
A
359 361anti-parallel
Strand 3
A
367 368anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
399 401first strand
Strand 2
A
407 409anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
68 73first strand
Strand 2
B
35 40parallel
Strand 3
B
97 101parallel
Strand 4
B
124 128parallel
Strand 5
B
144 146parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
199 200first strand
Strand 2
B
169 175parallel
Strand 3
B
204 206parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
199 200first strand
Strand 2
B
169 175parallel
Strand 3
B
226 230parallel
Strand 4
B
254 257parallel
Strand 5
B
277 280parallel
Strand 6
B
362 366anti-parallel
Strand 7
B
372 377anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
342 343first strand
Strand 2
B
346 347anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 6first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
78 84anti-parallel
Strand 4
H
68 72anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
113 117parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
33 40anti-parallel
Strand 5
H
43 52anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
113 117parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
106 109anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
126 130first strand
Strand 2
H
141 151anti-parallel
Strand 3
H
181 190anti-parallel
Strand 4
H
169 171anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
126 130first strand
Strand 2
H
141 151anti-parallel
Strand 3
H
181 190anti-parallel
Strand 4
H
175 176anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
157 160first strand
Strand 2
H
200 205anti-parallel
Strand 3
H
210 215anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 6first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
84 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 48anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
114 118first strand
Strand 2
L
130 139anti-parallel
Strand 3
L
173 181anti-parallel
Strand 4
L
159 163anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
153 155first strand
Strand 2
L
145 150anti-parallel
Strand 3
L
191 197anti-parallel
Strand 4
L
205 210anti-parallel
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