Analysis of interatomic Contacts of Structural Units in PDB entry:
5TQB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TQB entry

There are 2 chains in PDB entry 5TQB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4LYS 272
B
 SER 27LEU 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5TQB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 29Right-handed 310
Helix 2
AA2
A
34 40Right-handed alpha
Helix 3
AA3
A
90 98Right-handed alpha
Helix 4
AA4
A
111 130Right-handed alpha
Helix 5
AA5
A
132 139Right-handed alpha
Helix 6
AA6
A
155 158Right-handed 310
Helix 7
AA7
A
165 176Right-handed alpha
Helix 8
AA8
A
178 186Right-handed alpha
Helix 9
AA9
A
214 219Right-handed alpha
Helix 10
AB1
A
220 227Right-handed alpha
Helix 11
AB2
A
238 240Right-handed 310
Helix 12
AB3
A
241 246Right-handed alpha
Helix 13
AB4
A
247 250Right-handed 310
Helix 14
AB5
A
259 272Right-handed alpha
Helix 15
AB6
B
29 43Right-handed alpha
Helix 16
AB7
B
45 59Right-handed alpha
Helix 17
AB8
B
66 81Right-handed alpha
Helix 18
AB9
B
83 98Right-handed alpha
Helix 19
AC1
B
104 109Right-handed alpha
Helix 20
AC2
B
111 121Right-handed alpha
Helix 21
AC3
B
125 152Right-handed alpha
Helix 22
AC4
B
156 183Right-handed alpha
Helix 23
AC5
B
191 207Right-handed alpha
Helix 24
AC6
B
210 224Right-handed alpha
Helix 25
AC7
B
226 239Right-handed alpha
Helix 26
AC8
B
253 267Right-handed alpha
Helix 27
AC9
B
269 284Right-handed alpha
Helix 28
AD1
B
287 308Right-handed alpha
Helix 29
AD2
B
309 311Right-handed 310
Helix 30
AD3
B
316 340Right-handed alpha
Helix 31
AD4
B
343 360Right-handed alpha
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There are 2 sheets in PDB entry 5TQB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
A
6 10anti-parallel
Strand 3
A
151 153parallel
Strand 4
A
255 258parallel
Strand 5
A
210 213parallel
Strand 6
A
233 236parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
105 106anti-parallel
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