Analysis of interatomic Contacts of Structural Units in PDB entry:
5TS2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TS2 entry

There are 6 chains in PDB entry 5TS2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -6LYS 158
B
 MET 1LYS 158
C
 ALA -6LYS 158
D
 HIS -1PHE 157
E
 ALA -6LYS 158
F
 HIS 0LYS 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 5TS2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
38 42Right-handed 310
Helix 3
AA3
A
46 59Right-handed alpha
Helix 4
AA4
A
72 80Right-handed alpha
Helix 5
AA5
A
94 109Right-handed alpha
Helix 6
AA6
A
120 124Right-handed 310
Helix 7
AA7
A
127 137Right-handed alpha
Helix 8
AA8
A
146 158Right-handed alpha
Helix 9
AA9
B
14 28Right-handed alpha
Helix 10
AB1
B
38 42Right-handed 310
Helix 11
AB2
B
46 59Right-handed alpha
Helix 12
AB3
B
72 80Right-handed alpha
Helix 13
AB4
B
94 109Right-handed alpha
Helix 14
AB5
B
120 124Right-handed 310
Helix 15
AB6
B
127 137Right-handed alpha
Helix 16
AB7
B
146 157Right-handed alpha
Helix 17
AB8
C
14 28Right-handed alpha
Helix 18
AB9
C
38 42Right-handed 310
Helix 19
AC1
C
46 59Right-handed alpha
Helix 20
AC2
C
72 80Right-handed alpha
Helix 21
AC3
C
94 109Right-handed alpha
Helix 22
AC4
C
120 124Right-handed 310
Helix 23
AC5
C
127 137Right-handed alpha
Helix 24
AC6
C
146 157Right-handed alpha
Helix 25
AC7
D
14 28Right-handed alpha
Helix 26
AC8
D
38 42Right-handed 310
Helix 27
AC9
D
46 59Right-handed alpha
Helix 28
AD1
D
72 80Right-handed alpha
Helix 29
AD2
D
94 109Right-handed alpha
Helix 30
AD3
D
120 124Right-handed 310
Helix 31
AD4
D
127 137Right-handed alpha
Helix 32
AD5
D
146 157Right-handed alpha
Helix 33
AD6
E
14 28Right-handed alpha
Helix 34
AD7
E
38 42Right-handed 310
Helix 35
AD8
E
46 59Right-handed alpha
Helix 36
AD9
E
72 80Right-handed alpha
Helix 37
AE1
E
94 109Right-handed alpha
Helix 38
AE2
E
120 124Right-handed 310
Helix 39
AE3
E
127 137Right-handed alpha
Helix 40
AE4
E
146 157Right-handed alpha
Helix 41
AE5
F
14 28Right-handed alpha
Helix 42
AE6
F
38 42Right-handed 310
Helix 43
AE7
F
46 59Right-handed alpha
Helix 44
AE8
F
72 80Right-handed alpha
Helix 45
AE9
F
94 109Right-handed alpha
Helix 46
AF1
F
127 137Right-handed alpha
Helix 47
AF2
F
146 158Right-handed alpha
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There are 3 sheets in PDB entry 5TS2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
30 36parallel
Strand 3
A
3 8parallel
Strand 4
A
84 88parallel
Strand 5
A
113 117parallel
Strand 6
D
113 117anti-parallel
Strand 7
D
84 88parallel
Strand 8
D
3 8parallel
Strand 9
D
30 36parallel
Strand 10
D
64 69parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
30 36parallel
Strand 3
B
3 8parallel
Strand 4
B
84 88parallel
Strand 5
B
113 117parallel
Strand 6
E
113 117anti-parallel
Strand 7
E
84 88parallel
Strand 8
E
3 8parallel
Strand 9
E
30 36parallel
Strand 10
E
64 69parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 69first strand
Strand 2
C
30 36parallel
Strand 3
C
3 8parallel
Strand 4
C
84 88parallel
Strand 5
C
113 117parallel
Strand 6
F
113 117anti-parallel
Strand 7
F
84 88parallel
Strand 8
F
3 8parallel
Strand 9
F
30 36parallel
Strand 10
F
64 69parallel
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