Analysis of interatomic Contacts of Structural Units in PDB entry:
5TSG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TSG entry

There are 3 chains in PDB entry 5TSG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 181	ASP 568
C	ALA 181	ASP 568
D	ALA 181	ASP 568

There are 47 helices in PDB entry 5TSG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	181	197	Right-handed alpha
Helix 2	AA2	B	228	230	Right-handed 310
Helix 3	AA3	B	231	243	Right-handed alpha
Helix 4	AA4	B	297	301	Right-handed 310
Helix 5	AA5	B	303	315	Right-handed alpha
Helix 6	AA6	B	330	342	Right-handed alpha
Helix 7	AA7	B	375	386	Right-handed alpha
Helix 8	AA8	B	398	411	Right-handed alpha
Helix 9	AA9	B	423	434	Right-handed alpha
Helix 10	AB1	B	437	444	Right-handed alpha
Helix 11	AB2	B	468	475	Right-handed alpha
Helix 12	AB3	B	481	485	Right-handed 310
Helix 13	AB4	B	514	524	Right-handed alpha
Helix 14	AB5	B	526	537	Right-handed alpha
Helix 15	AB6	B	541	552	Right-handed alpha
Helix 16	AB7	B	556	564	Right-handed alpha
Helix 17	AB8	C	182	197	Right-handed alpha
Helix 18	AB9	C	228	230	Right-handed 310
Helix 19	AC1	C	231	243	Right-handed alpha
Helix 20	AC2	C	297	301	Right-handed 310
Helix 21	AC3	C	303	315	Right-handed alpha
Helix 22	AC4	C	330	342	Right-handed alpha
Helix 23	AC5	C	369	373	Right-handed 310
Helix 24	AC6	C	375	385	Right-handed alpha
Helix 25	AC7	C	398	411	Right-handed alpha
Helix 26	AC8	C	424	434	Right-handed alpha
Helix 27	AC9	C	437	445	Right-handed alpha
Helix 28	AD1	C	468	475	Right-handed alpha
Helix 29	AD2	C	481	485	Right-handed 310
Helix 30	AD3	C	514	523	Right-handed alpha
Helix 31	AD4	C	526	537	Right-handed alpha
Helix 32	AD5	C	541	552	Right-handed alpha
Helix 33	AD6	C	556	564	Right-handed alpha
Helix 34	AD7	D	182	197	Right-handed alpha
Helix 35	AD8	D	231	243	Right-handed alpha
Helix 36	AD9	D	303	315	Right-handed alpha
Helix 37	AE1	D	330	343	Right-handed alpha
Helix 38	AE2	D	375	384	Right-handed alpha
Helix 39	AE3	D	398	411	Right-handed alpha
Helix 40	AE4	D	423	434	Right-handed alpha
Helix 41	AE5	D	437	444	Right-handed alpha
Helix 42	AE6	D	468	475	Right-handed alpha
Helix 43	AE7	D	481	485	Right-handed 310
Helix 44	AE8	D	514	523	Right-handed alpha
Helix 45	AE9	D	526	537	Right-handed alpha
Helix 46	AF1	D	541	552	Right-handed alpha
Helix 47	AF2	D	556	564	Right-handed alpha

There are 9 sheets in PDB entry 5TSG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	225	first strand
Strand 2	B	211	217	anti-parallel
Strand 3	B	201	206	anti-parallel
Strand 4	B	280	288	anti-parallel
Strand 5	B	268	277	anti-parallel
Strand 6	B	254	260	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	367	first strand
Strand 2	B	349	353	parallel
Strand 3	B	390	393	parallel
Strand 4	B	414	417	parallel
Strand 5	B	319	324	parallel
Strand 6	B	445	457	parallel
Strand 7	B	501	512	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	465	first strand
Strand 2	B	487	490	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	225	first strand
Strand 2	C	211	217	anti-parallel
Strand 3	C	201	206	anti-parallel
Strand 4	C	280	288	anti-parallel
Strand 5	C	269	277	anti-parallel
Strand 6	C	254	258	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	367	first strand
Strand 2	C	349	353	parallel
Strand 3	C	390	393	parallel
Strand 4	C	414	419	parallel
Strand 5	C	319	324	parallel
Strand 6	C	447	457	parallel
Strand 7	C	501	512	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	465	first strand
Strand 2	C	487	490	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	225	first strand
Strand 2	D	213	217	anti-parallel
Strand 3	D	201	203	anti-parallel
Strand 4	D	281	287	anti-parallel
Strand 5	D	268	276	anti-parallel
Strand 6	D	254	260	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	366	first strand
Strand 2	D	349	352	parallel
Strand 3	D	390	395	parallel
Strand 4	D	414	419	parallel
Strand 5	D	319	324	parallel
Strand 6	D	445	457	parallel
Strand 7	D	501	512	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	462	465	first strand
Strand 2	D	487	490	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TSG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TSG