Analysis of interatomic Contacts of Structural Units in PDB entry:
5TSH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TSH entry

There are 4 chains in PDB entry 5TSH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 182	ASP 567
B	ALA 181	ASP 568
C	ASP 180	ASP 567
D	PRO 182	PHE 383

There are106 helices in PDB entry 5TSH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	182	197	Right-handed alpha
Helix 2	AA2	A	228	230	Right-handed 310
Helix 3	AA3	A	231	243	Right-handed alpha
Helix 4	AA4	A	296	300	Right-handed 310
Helix 5	AA5	A	303	315	Right-handed alpha
Helix 6	AA6	A	330	343	Right-handed alpha
Helix 7	AA7	A	369	373	Right-handed 310
Helix 8	AA8	A	375	385	Right-handed alpha
Helix 9	AA9	A	398	413	Right-handed alpha
Helix 10	AB1	A	423	435	Right-handed alpha
Helix 11	AB2	A	437	444	Right-handed alpha
Helix 12	AB3	A	468	476	Right-handed alpha
Helix 13	AB4	A	481	485	Right-handed 310
Helix 14	AB5	A	493	497	Right-handed 310
Helix 15	AB6	A	514	523	Right-handed alpha
Helix 16	AB7	A	526	537	Right-handed alpha
Helix 17	AB8	A	541	552	Right-handed alpha
Helix 18	AB9	A	556	564	Right-handed alpha
Helix 19	AC1	B	182	197	Right-handed alpha
Helix 20	AC2	B	228	230	Right-handed 310
Helix 21	AC3	B	231	243	Right-handed alpha
Helix 22	AC4	B	296	300	Right-handed 310
Helix 23	AC5	B	303	315	Right-handed alpha
Helix 24	AC6	B	330	343	Right-handed alpha
Helix 25	AC7	B	369	373	Right-handed 310
Helix 26	AC8	B	375	384	Right-handed alpha
Helix 27	AC9	B	398	412	Right-handed alpha
Helix 28	AD1	B	423	435	Right-handed alpha
Helix 29	AD2	B	437	444	Right-handed alpha
Helix 30	AD3	B	468	476	Right-handed alpha
Helix 31	AD4	B	481	485	Right-handed 310
Helix 32	AD5	B	493	497	Right-handed 310
Helix 33	AD6	B	514	523	Right-handed alpha
Helix 34	AD7	B	526	537	Right-handed alpha
Helix 35	AD8	B	541	552	Right-handed alpha
Helix 36	AD9	B	556	564	Right-handed alpha
Helix 37	AE1	C	181	197	Right-handed alpha
Helix 38	AE2	C	228	230	Right-handed 310
Helix 39	AE3	C	231	243	Right-handed alpha
Helix 40	AE4	C	296	300	Right-handed 310
Helix 41	AE5	C	303	315	Right-handed alpha
Helix 42	AE6	C	330	343	Right-handed alpha
Helix 43	AE7	C	369	373	Right-handed 310
Helix 44	AE8	C	375	385	Right-handed alpha
Helix 45	AE9	C	398	413	Right-handed alpha
Helix 46	AF1	C	423	434	Right-handed alpha
Helix 47	AF2	C	437	444	Right-handed alpha
Helix 48	AF3	C	468	476	Right-handed alpha
Helix 49	AF4	C	481	485	Right-handed 310
Helix 50	AF5	C	493	497	Right-handed 310
Helix 51	AF6	C	514	524	Right-handed alpha
Helix 52	AF7	C	526	537	Right-handed alpha
Helix 53	AF8	C	541	552	Right-handed alpha
Helix 54	AF9	C	556	564	Right-handed alpha
Helix 55	AG1	D	183	197	Right-handed alpha
Helix 56	AG2	D	228	230	Right-handed 310
Helix 57	AG3	D	231	243	Right-handed alpha
Helix 58	AG4	D	296	300	Right-handed 310
Helix 59	AG5	D	303	315	Right-handed alpha
Helix 60	AG6	D	330	343	Right-handed alpha
Helix 61	AG7	D	375	385	Right-handed alpha
Helix 62	AG8	D	398	412	Right-handed alpha
Helix 63	AG9	D	423	434	Right-handed alpha
Helix 64	AH1	D	437	444	Right-handed alpha
Helix 65	AH2	D	468	475	Right-handed alpha
Helix 66	AH3	D	481	485	Right-handed 310
Helix 67	AH4	D	493	497	Right-handed 310
Helix 68	AH5	D	514	523	Right-handed alpha
Helix 69	AH6	D	526	537	Right-handed alpha
Helix 70	AH7	D	541	552	Right-handed alpha
Helix 71	AH8	D	556	564	Right-handed alpha
Helix 72	AH9	E	183	197	Right-handed alpha
Helix 73	AI1	E	228	230	Right-handed 310
Helix 74	AI2	E	231	243	Right-handed alpha
Helix 75	AI3	E	296	300	Right-handed 310
Helix 76	AI4	E	303	315	Right-handed alpha
Helix 77	AI5	E	330	343	Right-handed alpha
Helix 78	AI6	E	369	373	Right-handed 310
Helix 79	AI7	E	375	385	Right-handed alpha
Helix 80	AI8	E	398	411	Right-handed alpha
Helix 81	AI9	E	423	435	Right-handed alpha
Helix 82	AJ1	E	437	444	Right-handed alpha
Helix 83	AJ2	E	468	476	Right-handed alpha
Helix 84	AJ3	E	493	497	Right-handed 310
Helix 85	AJ4	E	514	523	Right-handed alpha
Helix 86	AJ5	E	526	537	Right-handed alpha
Helix 87	AJ6	E	541	552	Right-handed alpha
Helix 88	AJ7	E	556	564	Right-handed alpha
Helix 89	AJ8	F	181	197	Right-handed alpha
Helix 90	AJ9	F	228	230	Right-handed 310
Helix 91	AK1	F	231	243	Right-handed alpha
Helix 92	AK2	F	296	300	Right-handed 310
Helix 93	AK3	F	303	315	Right-handed alpha
Helix 94	AK4	F	330	343	Right-handed alpha
Helix 95	AK5	F	369	373	Right-handed 310
Helix 96	AK6	F	375	384	Right-handed alpha
Helix 97	AK7	F	398	411	Right-handed alpha
Helix 98	AK8	F	423	435	Right-handed alpha
Helix 99	AK9	F	437	444	Right-handed alpha
Helix 100	AL1	F	468	476	Right-handed alpha
Helix 101	AL2	F	481	485	Right-handed 310
Helix 102	AL3	F	493	497	Right-handed 310
Helix 103	AL4	F	514	523	Right-handed alpha
Helix 104	AL5	F	526	537	Right-handed alpha
Helix 105	AL6	F	541	552	Right-handed alpha
Helix 106	AL7	F	556	564	Right-handed alpha

There are 18 sheets in PDB entry 5TSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	225	first strand
Strand 2	A	211	217	anti-parallel
Strand 3	A	201	206	anti-parallel
Strand 4	A	280	288	anti-parallel
Strand 5	A	269	277	anti-parallel
Strand 6	A	254	258	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	367	first strand
Strand 2	A	349	353	parallel
Strand 3	A	390	393	parallel
Strand 4	A	414	419	parallel
Strand 5	A	319	324	parallel
Strand 6	A	445	457	parallel
Strand 7	A	501	512	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	465	first strand
Strand 2	A	487	490	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	225	first strand
Strand 2	B	211	217	anti-parallel
Strand 3	B	201	206	anti-parallel
Strand 4	B	280	287	anti-parallel
Strand 5	B	270	277	anti-parallel
Strand 6	B	254	258	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	367	first strand
Strand 2	B	349	353	parallel
Strand 3	B	390	393	parallel
Strand 4	B	414	419	parallel
Strand 5	B	319	324	parallel
Strand 6	B	445	457	parallel
Strand 7	B	501	512	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	464	first strand
Strand 2	B	488	490	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	225	first strand
Strand 2	C	211	217	anti-parallel
Strand 3	C	201	206	anti-parallel
Strand 4	C	280	288	anti-parallel
Strand 5	C	268	277	anti-parallel
Strand 6	C	254	260	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	367	first strand
Strand 2	C	349	353	parallel
Strand 3	C	390	393	parallel
Strand 4	C	414	419	parallel
Strand 5	C	319	324	parallel
Strand 6	C	445	457	parallel
Strand 7	C	501	512	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	465	first strand
Strand 2	C	487	490	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	225	first strand
Strand 2	D	211	217	anti-parallel
Strand 3	D	201	206	anti-parallel
Strand 4	D	280	288	anti-parallel
Strand 5	D	268	277	anti-parallel
Strand 6	D	254	260	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	367	first strand
Strand 2	D	349	353	parallel
Strand 3	D	390	393	parallel
Strand 4	D	414	419	parallel
Strand 5	D	319	324	parallel
Strand 6	D	445	457	parallel
Strand 7	D	501	512	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	462	464	first strand
Strand 2	D	488	490	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	220	225	first strand
Strand 2	E	211	217	anti-parallel
Strand 3	E	201	206	anti-parallel
Strand 4	E	280	288	anti-parallel
Strand 5	E	267	277	anti-parallel
Strand 6	E	254	261	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	364	367	first strand
Strand 2	E	349	353	parallel
Strand 3	E	390	393	parallel
Strand 4	E	414	419	parallel
Strand 5	E	319	324	parallel
Strand 6	E	445	457	parallel
Strand 7	E	501	512	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	462	464	first strand
Strand 2	E	488	490	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	220	225	first strand
Strand 2	F	211	217	anti-parallel
Strand 3	F	201	206	anti-parallel
Strand 4	F	280	288	anti-parallel
Strand 5	F	269	277	anti-parallel
Strand 6	F	254	259	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	363	367	first strand
Strand 2	F	349	353	parallel
Strand 3	F	390	393	parallel
Strand 4	F	414	419	parallel
Strand 5	F	319	324	parallel
Strand 6	F	445	457	parallel
Strand 7	F	501	512	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	462	465	first strand
Strand 2	F	487	490	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TSH

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TSH