Analysis of interatomic Contacts of Structural Units in PDB entry:
5TT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TT0 entry

There are 2 chains in PDB entry 5TT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2TYR 255
B
 THR 2TYR 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5TT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 27Right-handed alpha
Helix 2
AA2
A
37 48Right-handed alpha
Helix 3
AA3
A
62 70Right-handed alpha
Helix 4
AA4
A
94 106Right-handed alpha
Helix 5
AA5
A
106 115Right-handed alpha
Helix 6
AA6
A
116 123Right-handed alpha
Helix 7
AA7
A
133 137Right-handed 310
Helix 8
AA8
A
142 164Right-handed alpha
Helix 9
AA9
A
180 182Right-handed 310
Helix 10
AB1
A
183 190Right-handed alpha
Helix 11
AB2
A
192 198Right-handed alpha
Helix 12
AB3
A
199 201Right-handed 310
Helix 13
AB4
A
208 220Right-handed alpha
Helix 14
AB5
A
221 225Right-handed 310
Helix 15
AB6
A
237 241Right-handed 310
Helix 16
AB7
A
242 251Right-handed alpha
Helix 17
AB8
B
14 27Right-handed alpha
Helix 18
AB9
B
37 49Right-handed alpha
Helix 19
AC1
B
62 70Right-handed alpha
Helix 20
AC2
B
94 106Right-handed alpha
Helix 21
AC3
B
106 115Right-handed alpha
Helix 22
AC4
B
116 124Right-handed alpha
Helix 23
AC5
B
133 137Right-handed 310
Helix 24
AC6
B
142 164Right-handed alpha
Helix 25
AC7
B
180 190Right-handed alpha
Helix 26
AC8
B
194 201Right-handed 310
Helix 27
AC9
B
208 220Right-handed alpha
Helix 28
AD1
B
221 225Right-handed 310
Helix 29
AD2
B
237 241Right-handed 310
Helix 30
AD3
B
242 251Right-handed alpha
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There are 2 sheets in PDB entry 5TT0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
30 35parallel
Strand 3
A
6 10parallel
Strand 4
A
77 80parallel
Strand 5
A
126 131parallel
Strand 6
A
168 175parallel
Strand 7
A
231 234parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
30 35parallel
Strand 3
B
6 9parallel
Strand 4
B
77 80parallel
Strand 5
B
126 131parallel
Strand 6
B
168 175parallel
Strand 7
B
231 234parallel
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