Analysis of interatomic Contacts of Structural Units in PDB entry:
5TT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TT2 entry

There are 4 chains in PDB entry 5TT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 29THR 230
C
 TYR 232PRO 418
D
 GLY 29THR 230
D
 TYR 232PRO 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5TT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
36 44Right-handed alpha
Helix 2
AA2
C
84 98Right-handed alpha
Helix 3
AA3
C
108 118Right-handed alpha
Helix 4
AA4
C
136 147Right-handed alpha
Helix 5
AA5
C
158 165Right-handed alpha
Helix 6
AA6
C
187 196Right-handed alpha
Helix 7
AA7
C
216 221Right-handed 310
Helix 8
AA8
C
232 237Right-handed alpha
Helix 9
AA9
C
248 263Right-handed alpha
Helix 10
AB1
C
267 279Right-handed alpha
Helix 11
AB2
C
280 301Right-handed alpha
Helix 12
AB3
C
318 326Right-handed alpha
Helix 13
AB4
C
340 351Right-handed alpha
Helix 14
AB5
C
401 416Right-handed alpha
Helix 15
AB6
D
36 44Right-handed alpha
Helix 16
AB7
D
84 98Right-handed alpha
Helix 17
AB8
D
108 118Right-handed alpha
Helix 18
AB9
D
136 147Right-handed alpha
Helix 19
AC1
D
158 165Right-handed alpha
Helix 20
AC2
D
187 196Right-handed alpha
Helix 21
AC3
D
217 221Right-handed 310
Helix 22
AC4
D
232 237Right-handed alpha
Helix 23
AC5
D
248 263Right-handed alpha
Helix 24
AC6
D
267 279Right-handed alpha
Helix 25
AC7
D
280 301Right-handed alpha
Helix 26
AC8
D
318 326Right-handed alpha
Helix 27
AC9
D
340 351Right-handed alpha
Helix 28
AD1
D
401 417Right-handed alpha
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There are 4 sheets in PDB entry 5TT2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 106first strand
Strand 2
C
241 246anti-parallel
Strand 3
C
224 229anti-parallel
Strand 4
C
202 206parallel
Strand 5
C
170 176parallel
Strand 6
C
125 129parallel
Strand 7
C
150 154parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
305 309first strand
Strand 2
C
332 337anti-parallel
Strand 3
C
392 396anti-parallel
Strand 4
C
366 368anti-parallel
Strand 5
C
355 356parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 106first strand
Strand 2
D
241 246anti-parallel
Strand 3
D
224 229anti-parallel
Strand 4
D
202 206parallel
Strand 5
D
170 176parallel
Strand 6
D
125 129parallel
Strand 7
D
150 154parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
305 309first strand
Strand 2
D
332 337anti-parallel
Strand 3
D
392 396anti-parallel
Strand 4
D
366 368anti-parallel
Strand 5
D
355 356parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il