Analysis of interatomic Contacts of Structural Units in PDB entry:
5TU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TU6 entry

There are 2 chains in PDB entry 5TU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 296
B
 ILE 30PRO 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5TU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 27Right-handed alpha
Helix 2
AA2
A
33 44Right-handed alpha
Helix 3
AA3
A
76 96Right-handed alpha
Helix 4
AA4
A
101 109Right-handed alpha
Helix 5
AA5
A
113 115Right-handed 310
Helix 6
AA6
A
129 132Right-handed 310
Helix 7
AA7
A
144 155Right-handed alpha
Helix 8
AA8
A
161 166Right-handed 310
Helix 9
AA9
A
192 194Right-handed 310
Helix 10
AB1
A
196 203Right-handed alpha
Helix 11
AB2
A
204 207Right-handed 310
Helix 12
AB3
A
208 213Right-handed alpha
Helix 13
AB4
A
214 216Right-handed 310
Helix 14
AB5
A
240 242Right-handed 310
Helix 15
AB6
A
243 248Right-handed alpha
Helix 16
AB7
A
251 262Right-handed alpha
Helix 17
AB8
A
276 281Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5TU6.

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 57first strand
Strand 2
A
60 70anti-parallel
Strand 3
A
117 125anti-parallel
Strand 4
A
134 141anti-parallel
Strand 5
A
168 176anti-parallel
Strand 6
A
181 190anti-parallel
Strand 7
A
218 225anti-parallel
Strand 8
A
233 238anti-parallel
Strand 9
A
270 275anti-parallel
Strand 10
A
286 295anti-parallel
Strand 11
A
48 57anti-parallel
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