Analysis of interatomic Contacts of Structural Units in PDB entry:
5TUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TUB entry

There are 4 chains in PDB entry 5TUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 317LYS 651
B
 PHE 317LEU 650
C
 ARG 322LYS 651
D
 GLU 318LEU 650
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 5TUB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
317 321Right-handed 310
Helix 2
AA2
A
338 346Right-handed alpha
Helix 3
AA3
A
354 366Right-handed alpha
Helix 4
AA4
A
371 380Right-handed alpha
Helix 5
AA5
A
388 412Right-handed alpha
Helix 6
AA6
A
414 420Right-handed alpha
Helix 7
AA7
A
421 437Right-handed alpha
Helix 8
AA8
A
450 467Right-handed alpha
Helix 9
AA9
A
475 488Right-handed alpha
Helix 10
AB1
A
489 505Right-handed alpha
Helix 11
AB2
A
506 509Right-handed 310
Helix 12
AB3
A
515 530Right-handed alpha
Helix 13
AB4
A
530 540Right-handed alpha
Helix 14
AB5
A
548 554Right-handed alpha
Helix 15
AB6
A
556 560Right-handed 310
Helix 16
AB7
A
561 574Right-handed alpha
Helix 17
AB8
A
581 592Right-handed alpha
Helix 18
AB9
A
593 600Right-handed alpha
Helix 19
AC1
A
603 613Right-handed alpha
Helix 20
AC2
A
619 636Right-handed alpha
Helix 21
AC3
A
641 648Right-handed alpha
Helix 22
AC4
B
317 322Right-handed 310
Helix 23
AC5
B
338 345Right-handed alpha
Helix 24
AC6
B
354 366Right-handed alpha
Helix 25
AC7
B
371 380Right-handed alpha
Helix 26
AC8
B
388 412Right-handed alpha
Helix 27
AC9
B
414 420Right-handed alpha
Helix 28
AD1
B
421 436Right-handed alpha
Helix 29
AD2
B
450 467Right-handed alpha
Helix 30
AD3
B
475 488Right-handed alpha
Helix 31
AD4
B
489 509Right-handed alpha
Helix 32
AD5
B
515 530Right-handed alpha
Helix 33
AD6
B
530 540Right-handed alpha
Helix 34
AD7
B
548 554Right-handed alpha
Helix 35
AD8
B
556 560Right-handed 310
Helix 36
AD9
B
561 573Right-handed alpha
Helix 37
AE1
B
580 600Right-handed alpha
Helix 38
AE2
B
603 613Right-handed alpha
Helix 39
AE3
B
619 636Right-handed alpha
Helix 40
AE4
B
641 649Right-handed alpha
Helix 41
AE5
C
338 346Right-handed alpha
Helix 42
AE6
C
354 366Right-handed alpha
Helix 43
AE7
C
371 380Right-handed alpha
Helix 44
AE8
C
388 412Right-handed alpha
Helix 45
AE9
C
414 420Right-handed alpha
Helix 46
AF1
C
421 436Right-handed alpha
Helix 47
AF2
C
450 467Right-handed alpha
Helix 48
AF3
C
475 488Right-handed alpha
Helix 49
AF4
C
489 509Right-handed alpha
Helix 50
AF5
C
515 530Right-handed alpha
Helix 51
AF6
C
530 540Right-handed alpha
Helix 52
AF7
C
548 554Right-handed alpha
Helix 53
AF8
C
556 560Right-handed 310
Helix 54
AF9
C
561 574Right-handed alpha
Helix 55
AG1
C
580 592Right-handed alpha
Helix 56
AG2
C
593 600Right-handed alpha
Helix 57
AG3
C
603 613Right-handed alpha
Helix 58
AG4
C
619 636Right-handed alpha
Helix 59
AG5
C
641 648Right-handed alpha
Helix 60
AG6
D
318 322Right-handed 310
Helix 61
AG7
D
338 346Right-handed alpha
Helix 62
AG8
D
354 366Right-handed alpha
Helix 63
AG9
D
371 380Right-handed alpha
Helix 64
AH1
D
388 412Right-handed alpha
Helix 65
AH2
D
414 420Right-handed alpha
Helix 66
AH3
D
421 436Right-handed alpha
Helix 67
AH4
D
442 446Right-handed 310
Helix 68
AH5
D
450 467Right-handed alpha
Helix 69
AH6
D
475 488Right-handed alpha
Helix 70
AH7
D
489 509Right-handed alpha
Helix 71
AH8
D
515 530Right-handed alpha
Helix 72
AH9
D
530 540Right-handed alpha
Helix 73
AI1
D
548 554Right-handed alpha
Helix 74
AI2
D
556 560Right-handed 310
Helix 75
AI3
D
561 574Right-handed alpha
Helix 76
AI4
D
580 592Right-handed alpha
Helix 77
AI5
D
593 601Right-handed alpha
Helix 78
AI6
D
603 613Right-handed alpha
Helix 79
AI7
D
614 618Right-handed 310
Helix 80
AI8
D
619 636Right-handed alpha
Helix 81
AI9
D
641 649Right-handed alpha
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There are no sheets in PDB entry 5TUB
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