Analysis of interatomic Contacts of Structural Units in PDB entry:
5TW9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TW9 entry

There are 6 chains in PDB entry 5TW9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 322ASP 384
B
 ASP 322LEU 383
C
 ASP 322ASP 384
D
 ASP 322ASP 384
E
 ASP 322LEU 383
F
 ASP 322ASP 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5TW9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
324 342Right-handed alpha
Helix 2
AA2
A
351 355Right-handed 310
Helix 3
AA3
A
356 381Right-handed alpha
Helix 4
AA4
B
324 342Right-handed alpha
Helix 5
AA5
B
351 355Right-handed 310
Helix 6
AA6
B
356 379Right-handed alpha
Helix 7
AA7
C
324 342Right-handed alpha
Helix 8
AA8
C
351 355Right-handed 310
Helix 9
AA9
C
356 381Right-handed alpha
Helix 10
AB1
D
324 342Right-handed alpha
Helix 11
AB2
D
351 355Right-handed 310
Helix 12
AB3
D
356 381Right-handed alpha
Helix 13
AB4
E
324 342Right-handed alpha
Helix 14
AB5
E
351 355Right-handed 310
Helix 15
AB6
E
356 382Right-handed alpha
Helix 16
AB7
F
324 342Right-handed alpha
Helix 17
AB8
F
351 355Right-handed 310
Helix 18
AB9
F
356 381Right-handed alpha
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There are no sheets in PDB entry 5TW9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il