Analysis of interatomic Contacts of Structural Units in PDB entry:
5TWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TWJ entry

There are 4 chains in PDB entry 5TWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 HIS -1GLU 155
D
 HIS -1GLU 155
A
 HIS -1GLU 155
B
 HIS -1GLU 155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5TWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
13 25Right-handed alpha
Helix 2
AA2
C
48 65Right-handed alpha
Helix 3
AA3
C
80 95Right-handed alpha
Helix 4
AA4
C
109 116Right-handed alpha
Helix 5
AA5
C
128 148Right-handed alpha
Helix 6
AA6
C
150 155Right-handed 310
Helix 7
AA7
D
13 25Right-handed alpha
Helix 8
AA8
D
48 65Right-handed alpha
Helix 9
AA9
D
80 95Right-handed alpha
Helix 10
AB1
D
109 116Right-handed alpha
Helix 11
AB2
D
128 148Right-handed alpha
Helix 12
AB3
D
150 154Right-handed 310
Helix 13
AB4
A
13 25Right-handed alpha
Helix 14
AB5
A
48 65Right-handed alpha
Helix 15
AB6
A
80 95Right-handed alpha
Helix 16
AB7
A
109 115Right-handed alpha
Helix 17
AB8
A
128 148Right-handed alpha
Helix 18
AB9
A
150 155Right-handed 310
Helix 19
AC1
B
13 25Right-handed alpha
Helix 20
AC2
B
48 65Right-handed alpha
Helix 21
AC3
B
80 95Right-handed alpha
Helix 22
AC4
B
109 116Right-handed alpha
Helix 23
AC5
B
128 148Right-handed alpha
Helix 24
AC6
B
150 155Right-handed 310
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There are 4 sheets in PDB entry 5TWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 38first strand
Strand 2
C
3 8parallel
Strand 3
C
98 102parallel
Strand 4
C
68 72parallel
Strand 5
C
118 120parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 38first strand
Strand 2
D
3 8parallel
Strand 3
D
98 102parallel
Strand 4
D
68 72parallel
Strand 5
D
118 120parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
3 8parallel
Strand 3
A
98 102parallel
Strand 4
A
68 72parallel
Strand 5
A
118 120parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
3 8parallel
Strand 3
B
98 102parallel
Strand 4
B
68 72parallel
Strand 5
B
118 120parallel
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