Analysis of interatomic Contacts of Structural Units in PDB entry:
5TXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TXG entry

There is 1 chain in PDB entry 5TXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 159ARG 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5TXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
163 168Right-handed 310
Helix 2
AA2
A
186 198Right-handed alpha
Helix 3
AA3
A
208 219Right-handed alpha
Helix 4
AA4
A
246 255Right-handed alpha
Helix 5
AA5
A
274 290Right-handed alpha
Helix 6
AA6
A
332 337Right-handed alpha
Helix 7
AA7
A
348 362Right-handed alpha
Helix 8
AA8
A
373 382Right-handed alpha
Helix 9
AA9
A
393 397Right-handed 310
Helix 10
AB1
A
432 441Right-handed alpha
Helix 11
AB2
A
468 478Right-handed alpha
Helix 12
AB3
A
491 498Right-handed 310
Helix 13
AB4
A
508 521Right-handed alpha
Helix 14
AB5
A
525 535Right-handed alpha
Helix 15
AB6
A
542 546Right-handed 310
Helix 16
AB7
A
549 553Right-handed 310
Helix 17
AB8
A
579 583Right-handed 310
Helix 18
AB9
A
585 597Right-handed alpha
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There are 5 sheets in PDB entry 5TXG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
294 299parallel
Strand 3
A
264 268parallel
Strand 4
A
202 206parallel
Strand 5
A
241 245parallel
Strand 6
A
224 226parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 320first strand
Strand 2
A
453 456parallel
Strand 3
A
405 408parallel
Strand 4
A
342 345parallel
Strand 5
A
388 391parallel
Strand 6
A
366 369parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 418first strand
Strand 2
A
422 430anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 556first strand
Strand 2
A
559 560anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 564first strand
Strand 2
A
570 572anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il