Analysis of interatomic Contacts of Structural Units in PDB entry:
5TXU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TXU entry

There is 1 chain in PDB entry 5TXU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 70TYR 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5TXU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 102Right-handed alpha
Helix 2
AA2
A
107 128Right-handed alpha
Helix 3
AA3
A
151 160Right-handed alpha
Helix 4
AA4
A
160 167Right-handed alpha
Helix 5
AA5
A
167 177Right-handed alpha
Helix 6
AA6
A
204 208Right-handed 310
Helix 7
AA7
A
223 227Right-handed 310
Helix 8
AA8
A
238 249Right-handed alpha
Helix 9
AA9
A
258 262Right-handed alpha
Helix 10
AB1
A
285 294Right-handed alpha
Helix 11
AB2
A
324 333Right-handed alpha
Helix 12
AB3
A
336 345Right-handed alpha
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There are 5 sheets in PDB entry 5TXU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 89first strand
Strand 2
A
74 78anti-parallel
Strand 3
A
139 140parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
181 185anti-parallel
Strand 3
A
349 352anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
322 323parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 237first strand
Strand 2
A
308 314anti-parallel
Strand 3
A
300 304anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 268first strand
Strand 2
A
274 279anti-parallel
Strand 3
A
282 284anti-parallel
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