Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TZ6 entry

There are 2 chains in PDB entry 5TZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 943	MET 1244
B	THR 943	MET 1244

There are 16 helices in PDB entry 5TZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	972	976	Right-handed 310
Helix 2	AA2	A	987	1003	Right-handed alpha
Helix 3	AA3	A	1087	1095	Right-handed alpha
Helix 4	AA4	A	1100	1111	Right-handed alpha
Helix 5	AA5	A	1117	1120	Right-handed 310
Helix 6	AA6	A	1151	1161	Right-handed alpha
Helix 7	AA7	A	1162	1166	Right-handed 310
Helix 8	AA8	A	1238	1243	Right-handed alpha
Helix 9	AA9	B	972	976	Right-handed 310
Helix 10	AB1	B	987	1003	Right-handed alpha
Helix 11	AB2	B	1088	1095	Right-handed alpha
Helix 12	AB3	B	1101	1111	Right-handed alpha
Helix 13	AB4	B	1117	1120	Right-handed 310
Helix 14	AB5	B	1151	1161	Right-handed alpha
Helix 15	AB6	B	1162	1166	Right-handed 310
Helix 16	AB7	B	1238	1243	Right-handed alpha

There are 4 sheets in PDB entry 5TZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	951	953	first strand
Strand 2	A	961	967	anti-parallel
Strand 3	A	1027	1036	anti-parallel
Strand 4	A	1039	1047	anti-parallel
Strand 5	A	1069	1078	anti-parallel
Strand 6	A	1008	1014	anti-parallel
Strand 7	A	1176	1187	anti-parallel
Strand 8	A	1225	1237	anti-parallel
Strand 9	A	1211	1219	anti-parallel
Strand 10	A	1195	1204	anti-parallel
Strand 11	A	1131	1137	anti-parallel
Strand 12	A	1122	1127	anti-parallel
Strand 13	A	1097	1099	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1019	1021	first strand
Strand 2	A	983	986	anti-parallel
Strand 3	A	978	980	anti-parallel
Strand 4	A	1113	1115	anti-parallel

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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	951	955	first strand
Strand 2	B	958	967	anti-parallel
Strand 3	B	1027	1035	anti-parallel
Strand 4	B	1040	1048	anti-parallel
Strand 5	B	1069	1078	anti-parallel
Strand 6	B	1008	1014	anti-parallel
Strand 7	B	1176	1187	anti-parallel
Strand 8	B	1225	1237	anti-parallel
Strand 9	B	1211	1219	anti-parallel
Strand 10	B	1195	1204	anti-parallel
Strand 11	B	1131	1137	anti-parallel
Strand 12	B	1122	1127	anti-parallel
Strand 13	B	1097	1099	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1019	1021	first strand
Strand 2	B	983	986	anti-parallel
Strand 3	B	978	980	anti-parallel
Strand 4	B	1113	1115	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZ6