Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TZ7 entry

There are 2 chains in PDB entry 5TZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 962ALA 1245
B
 LEU 962LYS 1250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5TZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
990 994Right-handed 310
Helix 2
AA2
A
1005 1020Right-handed alpha
Helix 3
AA3
A
1099 1107Right-handed alpha
Helix 4
AA4
A
1112 1123Right-handed alpha
Helix 5
AA5
A
1129 1132Right-handed 310
Helix 6
AA6
A
1154 1161Right-handed 310
Helix 7
AA7
A
1164 1173Right-handed alpha
Helix 8
AA8
A
1174 1180Right-handed alpha
Helix 9
AA9
B
990 994Right-handed 310
Helix 10
AB1
B
1005 1021Right-handed alpha
Helix 11
AB2
B
1099 1107Right-handed alpha
Helix 12
AB3
B
1112 1123Right-handed alpha
Helix 13
AB4
B
1129 1132Right-handed 310
Helix 14
AB5
B
1151 1156Right-handed alpha
Helix 15
AB6
B
1157 1161Right-handed 310
Helix 16
AB7
B
1164 1173Right-handed alpha
Helix 17
AB8
B
1174 1180Right-handed alpha
Helix 18
AB9
B
1244 1249Right-handed 310
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There are 4 sheets in PDB entry 5TZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
968 969first strand
Strand 2
A
978 986anti-parallel
Strand 3
A
1045 1056anti-parallel
Strand 4
A
1059 1067anti-parallel
Strand 5
A
1079 1089anti-parallel
Strand 6
A
1026 1034anti-parallel
Strand 7
A
1188 1199anti-parallel
Strand 8
A
1231 1243anti-parallel
Strand 9
A
1220 1225anti-parallel
Strand 10
A
1206 1212anti-parallel
Strand 11
A
1143 1149anti-parallel
Strand 12
A
1134 1140anti-parallel
Strand 13
A
1109 1110anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1039 1040first strand
Strand 2
A
1001 1003anti-parallel
Strand 3
A
996 998anti-parallel
Strand 4
A
1125 1127anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
968 970first strand
Strand 2
B
978 985anti-parallel
Strand 3
B
1046 1055anti-parallel
Strand 4
B
1059 1067anti-parallel
Strand 5
B
1079 1089anti-parallel
Strand 6
B
1026 1034anti-parallel
Strand 7
B
1188 1199anti-parallel
Strand 8
B
1231 1243anti-parallel
Strand 9
B
1219 1225anti-parallel
Strand 10
B
1206 1212anti-parallel
Strand 11
B
1143 1149anti-parallel
Strand 12
B
1134 1140anti-parallel
Strand 13
B
1109 1110anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1039 1040first strand
Strand 2
B
1001 1003anti-parallel
Strand 3
B
996 998anti-parallel
Strand 4
B
1125 1127anti-parallel
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