Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TZB entry

There are 4 chains in PDB entry 5TZB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 0	PRO 365
B	HIS 0	PRO 365
C	MET 1	ARG 367
G	MET 1	SER 341

There are127 helices in PDB entry 5TZB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	7	Right-handed 310
Helix 2	AA2	A	20	24	Right-handed 310
Helix 3	AA3	A	38	42	Right-handed 310
Helix 4	AA4	A	56	60	Right-handed 310
Helix 5	AA5	A	77	85	Right-handed alpha
Helix 6	AA6	A	98	110	Right-handed alpha
Helix 7	AA7	A	110	115	Right-handed alpha
Helix 8	AA8	A	135	139	Right-handed 310
Helix 9	AA9	A	142	153	Right-handed alpha
Helix 10	AB1	A	163	167	Right-handed 310
Helix 11	AB2	A	186	190	Right-handed 310
Helix 12	AB3	A	204	208	Right-handed 310
Helix 13	AB4	A	214	219	Right-handed 310
Helix 14	AB5	A	251	270	Right-handed alpha
Helix 15	AB6	A	311	313	Right-handed 310
Helix 16	AB7	A	314	336	Right-handed alpha
Helix 17	AB8	A	350	361	Right-handed alpha
Helix 18	AB9	B	3	7	Right-handed 310
Helix 19	AC1	B	20	24	Right-handed 310
Helix 20	AC2	B	38	42	Right-handed 310
Helix 21	AC3	B	56	60	Right-handed 310
Helix 22	AC4	B	77	85	Right-handed alpha
Helix 23	AC5	B	98	110	Right-handed alpha
Helix 24	AC6	B	110	115	Right-handed alpha
Helix 25	AC7	B	135	139	Right-handed 310
Helix 26	AC8	B	142	153	Right-handed alpha
Helix 27	AC9	B	163	167	Right-handed 310
Helix 28	AD1	B	186	190	Right-handed 310
Helix 29	AD2	B	204	208	Right-handed 310
Helix 30	AD3	B	214	219	Right-handed 310
Helix 31	AD4	B	251	270	Right-handed alpha
Helix 32	AD5	B	310	336	Right-handed alpha
Helix 33	AD6	B	350	361	Right-handed alpha
Helix 34	AD7	C	3	7	Right-handed 310
Helix 35	AD8	C	20	24	Right-handed 310
Helix 36	AD9	C	38	42	Right-handed 310
Helix 37	AE1	C	56	60	Right-handed 310
Helix 38	AE2	C	77	85	Right-handed alpha
Helix 39	AE3	C	98	110	Right-handed alpha
Helix 40	AE4	C	135	139	Right-handed 310
Helix 41	AE5	C	142	153	Right-handed alpha
Helix 42	AE6	C	163	167	Right-handed 310
Helix 43	AE7	C	186	190	Right-handed 310
Helix 44	AE8	C	204	208	Right-handed 310
Helix 45	AE9	C	214	219	Right-handed 310
Helix 46	AF1	C	251	270	Right-handed alpha
Helix 47	AF2	C	310	336	Right-handed alpha
Helix 48	AF3	C	350	361	Right-handed alpha
Helix 49	AF4	G	3	7	Right-handed 310
Helix 50	AF5	G	20	24	Right-handed 310
Helix 51	AF6	G	77	85	Right-handed alpha
Helix 52	AF7	G	98	110	Right-handed alpha
Helix 53	AF8	G	135	139	Right-handed 310
Helix 54	AF9	G	142	153	Right-handed alpha
Helix 55	AG1	G	163	167	Right-handed 310
Helix 56	AG2	G	186	190	Right-handed 310
Helix 57	AG3	G	204	208	Right-handed 310
Helix 58	AG4	G	214	219	Right-handed 310
Helix 59	AG5	G	251	270	Right-handed alpha
Helix 60	AG6	G	310	336	Right-handed alpha
Helix 61	AG7	G	350	361	Right-handed alpha
Helix 62	AG8	E	3	7	Right-handed 310
Helix 63	AG9	E	20	24	Right-handed 310
Helix 64	AH1	E	38	42	Right-handed 310
Helix 65	AH2	E	56	60	Right-handed 310
Helix 66	AH3	E	77	85	Right-handed alpha
Helix 67	AH4	E	98	110	Right-handed alpha
Helix 68	AH5	E	110	115	Right-handed alpha
Helix 69	AH6	E	135	139	Right-handed 310
Helix 70	AH7	E	142	153	Right-handed alpha
Helix 71	AH8	E	163	167	Right-handed 310
Helix 72	AH9	E	186	190	Right-handed 310
Helix 73	AI1	E	204	208	Right-handed 310
Helix 74	AI2	E	214	219	Right-handed 310
Helix 75	AI3	E	251	261	Right-handed alpha
Helix 76	AI4	E	261	270	Right-handed alpha
Helix 77	AI5	E	311	313	Right-handed 310
Helix 78	AI6	E	314	336	Right-handed alpha
Helix 79	AI7	E	350	361	Right-handed alpha
Helix 80	AI8	F	3	7	Right-handed 310
Helix 81	AI9	F	20	24	Right-handed 310
Helix 82	AJ1	F	38	42	Right-handed 310
Helix 83	AJ2	F	77	85	Right-handed alpha
Helix 84	AJ3	F	98	109	Right-handed alpha
Helix 85	AJ4	F	110	115	Right-handed alpha
Helix 86	AJ5	F	135	139	Right-handed 310
Helix 87	AJ6	F	142	153	Right-handed alpha
Helix 88	AJ7	F	163	167	Right-handed 310
Helix 89	AJ8	F	186	190	Right-handed 310
Helix 90	AJ9	F	204	208	Right-handed 310
Helix 91	AK1	F	214	219	Right-handed 310
Helix 92	AK2	F	251	270	Right-handed alpha
Helix 93	AK3	F	311	313	Right-handed 310
Helix 94	AK4	F	314	336	Right-handed alpha
Helix 95	AK5	F	350	361	Right-handed alpha
Helix 96	AK6	D	2	7	Right-handed 310
Helix 97	AK7	D	20	24	Right-handed 310
Helix 98	AK8	D	38	42	Right-handed 310
Helix 99	AK9	D	56	60	Right-handed 310
Helix 100	AL1	D	77	85	Right-handed alpha
Helix 101	AL2	D	98	110	Right-handed alpha
Helix 102	AL3	D	110	115	Right-handed alpha
Helix 103	AL4	D	135	139	Right-handed 310
Helix 104	AL5	D	142	153	Right-handed alpha
Helix 105	AL6	D	163	167	Right-handed 310
Helix 106	AL7	D	186	190	Right-handed 310
Helix 107	AL8	D	204	208	Right-handed 310
Helix 108	AL9	D	214	219	Right-handed 310
Helix 109	AM1	D	251	261	Right-handed alpha
Helix 110	AM2	D	261	270	Right-handed alpha
Helix 111	AM3	D	311	313	Right-handed 310
Helix 112	AM4	D	314	336	Right-handed alpha
Helix 113	AM5	D	350	361	Right-handed alpha
Helix 114	AM6	H	2	7	Right-handed 310
Helix 115	AM7	H	20	24	Right-handed 310
Helix 116	AM8	H	38	42	Right-handed 310
Helix 117	AM9	H	77	85	Right-handed alpha
Helix 118	AN1	H	98	110	Right-handed alpha
Helix 119	AN2	H	135	139	Right-handed 310
Helix 120	AN3	H	142	153	Right-handed alpha
Helix 121	AN4	H	163	167	Right-handed 310
Helix 122	AN5	H	186	190	Right-handed 310
Helix 123	AN6	H	204	208	Right-handed 310
Helix 124	AN7	H	214	219	Right-handed 310
Helix 125	AN8	H	251	270	Right-handed alpha
Helix 126	AN9	H	314	336	Right-handed alpha
Helix 127	AO1	H	350	361	Right-handed alpha

There are 36 sheets in PDB entry 5TZB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	36	first strand
Strand 2	A	43	51	anti-parallel
Strand 3	A	91	95	anti-parallel
Strand 4	A	124	128	parallel
Strand 5	A	75	76	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	87	first strand
Strand 2	A	62	71	anti-parallel
Strand 3	A	278	285	anti-parallel
Strand 4	A	240	246	parallel
Strand 5	A	193	200	anti-parallel
Strand 6	A	177	184	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	171	first strand
Strand 2	A	174	175	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	309	first strand
Strand 2	C	303	309	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	344	346	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	36	first strand
Strand 2	B	43	51	anti-parallel
Strand 3	B	91	95	anti-parallel
Strand 4	B	124	128	parallel
Strand 5	B	75	76	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	87	first strand
Strand 2	B	62	71	anti-parallel
Strand 3	B	278	285	anti-parallel
Strand 4	B	240	246	parallel
Strand 5	B	193	200	anti-parallel
Strand 6	B	177	184	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	171	first strand
Strand 2	B	174	175	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	309	first strand
Strand 2	D	303	309	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	344	346	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	36	first strand
Strand 2	C	43	51	anti-parallel
Strand 3	C	91	95	anti-parallel
Strand 4	C	124	128	parallel
Strand 5	C	75	76	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	87	first strand
Strand 2	C	62	71	anti-parallel
Strand 3	C	278	285	anti-parallel
Strand 4	C	240	246	parallel
Strand 5	C	193	200	anti-parallel
Strand 6	C	177	184	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	171	first strand
Strand 2	C	174	175	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	344	346	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	36	first strand
Strand 2	G	43	51	anti-parallel
Strand 3	G	91	95	anti-parallel
Strand 4	G	124	128	parallel
Strand 5	G	75	76	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	86	87	first strand
Strand 2	G	62	71	anti-parallel
Strand 3	G	278	285	anti-parallel
Strand 4	G	240	246	parallel
Strand 5	G	193	200	anti-parallel
Strand 6	G	177	184	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	170	171	first strand
Strand 2	G	174	175	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	303	309	first strand
Strand 2	H	303	309	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	339	341	first strand
Strand 2	G	344	346	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	36	first strand
Strand 2	E	43	51	anti-parallel
Strand 3	E	91	95	anti-parallel
Strand 4	E	124	128	parallel
Strand 5	E	75	76	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	87	first strand
Strand 2	E	62	71	anti-parallel
Strand 3	E	278	285	anti-parallel
Strand 4	E	240	246	parallel
Strand 5	E	193	200	anti-parallel
Strand 6	E	177	184	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	170	171	first strand
Strand 2	E	174	175	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	303	309	first strand
Strand 2	F	303	309	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	344	346	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	36	first strand
Strand 2	F	43	51	anti-parallel
Strand 3	F	91	95	anti-parallel
Strand 4	F	124	128	parallel
Strand 5	F	75	76	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	87	first strand
Strand 2	F	62	71	anti-parallel
Strand 3	F	278	285	anti-parallel
Strand 4	F	240	246	parallel
Strand 5	F	193	200	anti-parallel
Strand 6	F	177	184	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	170	171	first strand
Strand 2	F	174	175	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	344	346	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	36	first strand
Strand 2	D	43	51	anti-parallel
Strand 3	D	91	95	anti-parallel
Strand 4	D	124	128	parallel
Strand 5	D	75	76	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	87	first strand
Strand 2	D	62	71	anti-parallel
Strand 3	D	278	285	anti-parallel
Strand 4	D	240	246	parallel
Strand 5	D	193	200	anti-parallel
Strand 6	D	177	184	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	171	first strand
Strand 2	D	174	175	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	344	346	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	28	36	first strand
Strand 2	H	43	51	anti-parallel
Strand 3	H	91	95	anti-parallel
Strand 4	H	124	128	parallel
Strand 5	H	75	76	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	86	87	first strand
Strand 2	H	62	71	anti-parallel
Strand 3	H	278	285	anti-parallel
Strand 4	H	240	246	parallel
Strand 5	H	193	200	anti-parallel
Strand 6	H	177	184	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	171	first strand
Strand 2	H	174	175	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	339	341	first strand
Strand 2	H	344	346	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TZB

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZB