Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5TZN entry

There are 4 chains in PDB entry 5TZN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 91	THR 217
F	SER 39	ALA 179
G	SER 39	PRO 182
W	CYS 94	ASN 215

There are 6 helices in PDB entry 5TZN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	114	125	Right-handed alpha
Helix 2	AA2	A	134	144	Right-handed alpha
Helix 3	AA3	F	68	73	Right-handed alpha
Helix 4	AA4	G	68	74	Right-handed alpha
Helix 5	AA5	W	114	125	Right-handed alpha
Helix 6	AA6	W	134	144	Right-handed alpha

There are 8 sheets in PDB entry 5TZN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	101	first strand
Strand 2	A	104	108	anti-parallel
Strand 3	A	207	213	anti-parallel
Strand 4	A	151	159	parallel
Strand 5	A	164	167	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	129	first strand
Strand 2	A	207	213	anti-parallel
Strand 3	A	151	159	parallel
Strand 4	A	189	193	anti-parallel
Strand 5	A	196	200	anti-parallel
Strand 6	A	180	181	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	63	first strand
Strand 2	F	167	174	anti-parallel
Strand 3	F	98	107	anti-parallel
Strand 4	F	113	123	anti-parallel
Strand 5	F	130	136	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	66	first strand
Strand 2	F	83	87	anti-parallel
Strand 3	F	155	158	anti-parallel
Strand 4	F	146	148	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	63	first strand
Strand 2	G	167	174	anti-parallel
Strand 3	G	98	107	anti-parallel
Strand 4	G	113	123	anti-parallel
Strand 5	G	130	136	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	65	66	first strand
Strand 2	G	83	87	anti-parallel
Strand 3	G	155	158	anti-parallel
Strand 4	G	146	148	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	99	101	first strand
Strand 2	W	104	108	anti-parallel
Strand 3	W	207	213	anti-parallel
Strand 4	W	151	159	parallel
Strand 5	W	164	167	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	128	129	first strand
Strand 2	W	207	213	anti-parallel
Strand 3	W	151	159	parallel
Strand 4	W	189	193	anti-parallel
Strand 5	W	196	200	anti-parallel
Strand 6	W	180	181	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5TZN

Analysis of interatomic Contacts of Structural Units in PDB entry:
5TZN