Analysis of interatomic Contacts of Structural Units in PDB entry:
5U0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U0H entry

There is 1 chain in PDB entry 5U0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 543
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5U0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 96Right-handed alpha
Helix 2
AA2
A
115 120Right-handed 310
Helix 3
AA3
A
151 168Right-handed alpha
Helix 4
AA4
A
170 175Right-handed alpha
Helix 5
AA5
A
185 192Right-handed alpha
Helix 6
AA6
A
194 210Right-handed alpha
Helix 7
AA8
A
245 264Right-handed alpha
Helix 8
AA9
A
267 288Right-handed alpha
Helix 9
AB1
A
311 327Right-handed alpha
Helix 10
AB2
A
329 338Right-handed alpha
Helix 11
AB3
A
340 345Right-handed alpha
Helix 12
AB4
A
355 365Right-handed alpha
Helix 13
AB5
A
370 395Right-handed alpha
Helix 14
AB7
A
409 428Right-handed alpha
Helix 15
AB8
A
430 446Right-handed alpha
Helix 16
AB9
A
468 475Right-handed alpha
Helix 17
AC1
A
492 502Right-handed alpha
Helix 18
AC2
A
518 522Right-handed alpha
Helix 19
AC3
A
525 540Right-handed alpha
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There are 5 sheets in PDB entry 5U0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
40 42anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
61 67anti-parallel
Strand 4
A
70 72anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
61 67anti-parallel
Strand 4
A
75 77anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
109 111anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
121 124anti-parallel
Strand 3
A
239 242parallel
Strand 4
A
220 222anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il