Analysis of interatomic Contacts of Structural Units in PDB entry:
5U1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U1X entry

There is 1 chain in PDB entry 5U1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 31ILE 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5U1X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 48Right-handed alpha
Helix 2
AA2
A
89 93Right-handed alpha
Helix 3
AA3
A
131 135Right-handed 310
Helix 4
AA4
A
182 187Right-handed 310
Helix 5
AA5
A
231 238Right-handed alpha
Helix 6
AA6
A
241 249Right-handed alpha
Helix 7
AA7
A
284 288Right-handed 310
Helix 8
AA8
A
329 351Right-handed alpha
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There are 6 sheets in PDB entry 5U1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
304 328anti-parallel
Strand 3
A
250 262parallel
Strand 4
A
267 277anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
101 120anti-parallel
Strand 3
A
159 168anti-parallel
Strand 4
A
147 156anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 156first strand
Strand 2
A
159 168anti-parallel
Strand 3
A
101 120anti-parallel
Strand 4
A
304 328anti-parallel
Strand 5
A
292 301anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 66first strand
Strand 2
A
189 198anti-parallel
Strand 3
A
203 206anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 66first strand
Strand 2
A
189 198anti-parallel
Strand 3
A
228 230anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 77first strand
Strand 2
A
80 88anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il