Analysis of interatomic Contacts of Structural Units in PDB entry:
5U22


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U22 entry

There is 1 chain in PDB entry 5U22 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 29ALA 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5U22. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 67Right-handed alpha
Helix 2
AA2
A
68 71Right-handed 310
Helix 3
AA3
A
91 100Right-handed alpha
Helix 4
AA4
A
112 115Right-handed 310
Helix 5
AA5
A
124 143Right-handed alpha
Helix 6
AA6
A
155 160Right-handed alpha
Helix 7
AA7
A
161 165Right-handed 310
Helix 8
AA8
A
167 183Right-handed alpha
Helix 9
AA9
A
197 211Right-handed alpha
Helix 10
AB1
A
228 244Right-handed alpha
Helix 11
AB2
A
259 263Right-handed 310
Helix 12
AB3
A
265 279Right-handed alpha
Helix 13
AB4
A
308 319Right-handed alpha
Helix 14
AB5
A
370 374Right-handed 310
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There are 2 sheets in PDB entry 5U22. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 405first strand
Strand 2
A
376 384anti-parallel
Strand 3
A
423 430anti-parallel
Strand 4
A
349 355anti-parallel
Strand 5
A
338 344anti-parallel
Strand 6
A
323 328anti-parallel
Strand 7
A
31 43anti-parallel
Strand 8
A
361 367parallel
Strand 9
A
411 416anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
106 110parallel
Strand 3
A
147 151parallel
Strand 4
A
188 193parallel
Strand 5
A
217 220parallel
Strand 6
A
250 255parallel
Strand 7
A
283 286parallel
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