Analysis of interatomic Contacts of Structural Units in PDB entry:
5U76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U76 entry

There is 1 chain in PDB entry 5U76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 77PRO 1169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5U76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 85Right-handed alpha
Helix 2
AA2
A
88 117Right-handed alpha
Helix 3
AA3
A
152 177Right-handed alpha
Helix 4
AA4
A
188 207Right-handed alpha
Helix 5
AA5
A
216 218Right-handed 310
Helix 6
AA6
A
219 233Right-handed alpha
Helix 7
AA7
A
246 272Right-handed alpha
Helix 8
AA8
A
279 293Right-handed alpha
Helix 9
AA9
A
303 334Right-handed alpha
Helix 10
AB1
A
343 350Right-handed alpha
Helix 11
AB2
A
361 374Right-handed alpha
Helix 12
AB3
A
393 400Right-handed alpha
Helix 13
AB4
A
401 407Right-handed alpha
Helix 14
AB5
A
418 425Right-handed alpha
Helix 15
AB6
A
442 461Right-handed alpha
Helix 16
AB7
A
476 480Right-handed 310
Helix 17
AB8
A
488 502Right-handed alpha
Helix 18
AB9
A
504 514Right-handed alpha
Helix 19
AC1
A
526 535Right-handed alpha
Helix 20
AC2
A
558 570Right-handed alpha
Helix 21
AC3
A
613 618Right-handed alpha
Helix 22
AC4
A
748 753Right-handed alpha
Helix 23
AC5
A
765 770Right-handed alpha
Helix 24
AC6
A
785 795Right-handed alpha
Helix 25
AC7
A
800 804Right-handed 310
Helix 26
AC8
A
816 824Right-handed alpha
Helix 27
AC9
A
838 846Right-handed alpha
Helix 28
AD1
A
867 870Right-handed 310
Helix 29
AD2
A
871 885Right-handed alpha
Helix 30
AD3
A
896 901Right-handed 310
Helix 31
AD4
A
909 926Right-handed alpha
Helix 32
AD5
A
930 933Right-handed 310
Helix 33
AD6
A
934 939Right-handed alpha
Helix 34
AD7
A
945 955Right-handed alpha
Helix 35
AD8
A
956 957Right-handed 310
Helix 36
AD9
A
958 959Right-handed 310
Helix 37
AE1
A
960 970Right-handed alpha
Helix 38
AE2
A
987 992Right-handed 310
Helix 39
AE3
A
997 1007Right-handed alpha
Helix 40
AE4
A
1098 1100Right-handed 310
Helix 41
AE5
A
1101 1108Right-handed alpha
Helix 42
AE6
A
1110 1127Right-handed alpha
Helix 43
AE7
A
1129 1133Right-handed 310
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There are 6 sheets in PDB entry 5U76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 412first strand
Strand 2
A
383 387parallel
Strand 3
A
353 357parallel
Strand 4
A
431 435parallel
Strand 5
A
466 470parallel
Strand 6
A
484 487parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 544first strand
Strand 2
A
600 605anti-parallel
Strand 3
A
573 576anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 725first strand
Strand 2
A
740 742anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
829 831first strand
Strand 2
A
807 811parallel
Strand 3
A
775 780parallel
Strand 4
A
850 855parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 893first strand
Strand 2
A
942 943parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
980 985first strand
Strand 2
A
1160 1165anti-parallel
Strand 3
A
1009 1015anti-parallel
Strand 4
A
1145 1148anti-parallel
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