Analysis of interatomic Contacts of Structural Units in PDB entry:
5U9N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U9N entry

There are 2 chains in PDB entry 5U9N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 303SER 449
B
 TYR 306GLN 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5U9N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
307 320Right-handed alpha
Helix 2
AA2
A
324 329Right-handed 310
Helix 3
AA3
A
331 335Right-handed 310
Helix 4
AA4
A
339 350Right-handed alpha
Helix 5
AA5
A
355 365Right-handed alpha
Helix 6
AA6
A
394 413Right-handed alpha
Helix 7
AA7
A
420 439Right-handed alpha
Helix 8
AA8
A
441 448Right-handed alpha
Helix 9
AA9
B
307 320Right-handed alpha
Helix 10
AB1
B
325 329Right-handed 310
Helix 11
AB2
B
331 335Right-handed 310
Helix 12
AB3
B
339 350Right-handed alpha
Helix 13
AB4
B
355 365Right-handed alpha
Helix 14
AB5
B
394 413Right-handed alpha
Helix 15
AB6
B
421 439Right-handed alpha
Helix 16
AB7
B
441 449Right-handed alpha
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There are no sheets in PDB entry 5U9N
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il