Analysis of interatomic Contacts of Structural Units in PDB entry:
5U9W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5U9W entry

There are 3 chains in PDB entry 5U9W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1SER 419
B
 VAL 3VAL 423
C
 LEU 4LEU 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 5U9W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 21Right-handed alpha
Helix 2
AA2
A
28 48Right-handed alpha
Helix 3
AA3
A
49 79Right-handed alpha
Helix 4
AA4
A
80 82Right-handed 310
Helix 5
AA5
A
83 91Right-handed alpha
Helix 6
AA6
A
92 95Right-handed 310
Helix 7
AA7
A
96 101Right-handed alpha
Helix 8
AA8
A
101 118Right-handed alpha
Helix 9
AA9
A
119 137Right-handed alpha
Helix 10
AB1
A
139 149Right-handed alpha
Helix 11
AB2
A
161 166Right-handed alpha
Helix 12
AB3
A
169 183Right-handed alpha
Helix 13
AB4
A
185 195Right-handed alpha
Helix 14
AB5
A
198 221Right-handed alpha
Helix 15
AB6
A
244 289Right-handed alpha
Helix 16
AB7
A
294 310Right-handed alpha
Helix 17
AB8
A
313 330Right-handed alpha
Helix 18
AB9
A
331 340Right-handed alpha
Helix 19
AC1
A
341 343Right-handed 310
Helix 20
AC2
A
352 363Right-handed alpha
Helix 21
AC3
A
371 383Right-handed alpha
Helix 22
AC4
A
386 418Right-handed alpha
Helix 23
AC5
B
4 21Right-handed alpha
Helix 24
AC6
B
28 48Right-handed alpha
Helix 25
AC7
B
49 79Right-handed alpha
Helix 26
AC8
B
80 83Right-handed 310
Helix 27
AC9
B
84 91Right-handed alpha
Helix 28
AD1
B
92 95Right-handed 310
Helix 29
AD2
B
96 101Right-handed alpha
Helix 30
AD3
B
101 119Right-handed alpha
Helix 31
AD4
B
119 137Right-handed alpha
Helix 32
AD5
B
139 149Right-handed alpha
Helix 33
AD6
B
156 160Right-handed 310
Helix 34
AD7
B
164 168Right-handed 310
Helix 35
AD8
B
169 183Right-handed alpha
Helix 36
AD9
B
185 196Right-handed alpha
Helix 37
AE1
B
198 221Right-handed alpha
Helix 38
AE2
B
244 289Right-handed alpha
Helix 39
AE3
B
294 310Right-handed alpha
Helix 40
AE4
B
313 330Right-handed alpha
Helix 41
AE5
B
331 344Right-handed alpha
Helix 42
AE6
B
352 363Right-handed alpha
Helix 43
AE7
B
369 383Right-handed alpha
Helix 44
AE8
B
386 394Right-handed alpha
Helix 45
AE9
B
394 419Right-handed alpha
Helix 46
AF1
C
5 21Right-handed alpha
Helix 47
AF2
C
28 47Right-handed alpha
Helix 48
AF3
C
52 79Right-handed alpha
Helix 49
AF4
C
80 83Right-handed 310
Helix 50
AF5
C
84 91Right-handed alpha
Helix 51
AF6
C
92 95Right-handed 310
Helix 52
AF7
C
96 101Right-handed alpha
Helix 53
AF8
C
102 119Right-handed alpha
Helix 54
AF9
C
119 137Right-handed alpha
Helix 55
AG1
C
139 152Right-handed alpha
Helix 56
AG2
C
156 160Right-handed 310
Helix 57
AG3
C
161 166Right-handed alpha
Helix 58
AG4
C
169 183Right-handed alpha
Helix 59
AG5
C
186 195Right-handed alpha
Helix 60
AG6
C
198 218Right-handed alpha
Helix 61
AG7
C
244 286Right-handed alpha
Helix 62
AG8
C
294 310Right-handed alpha
Helix 63
AG9
C
313 330Right-handed alpha
Helix 64
AH1
C
331 344Right-handed alpha
Helix 65
AH2
C
354 363Right-handed alpha
Helix 66
AH3
C
368 383Right-handed alpha
Helix 67
AH4
C
386 393Right-handed alpha
Helix 68
AH5
C
393 417Right-handed alpha
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There are no sheets in PDB entry 5U9W
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