Analysis of interatomic Contacts of Structural Units in PDB entry:
5UA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UA0 entry

There are 3 chains in PDB entry 5UA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21MET 295
B
 ASN 20ARG 296
C
 ALA 17ARG 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5UA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 44Right-handed alpha
Helix 2
AA2
A
77 89Right-handed alpha
Helix 3
AA3
A
99 101Right-handed 310
Helix 4
AA4
A
102 114Right-handed alpha
Helix 5
AA5
A
125 137Right-handed alpha
Helix 6
AA6
A
147 164Right-handed alpha
Helix 7
AA7
A
179 184Right-handed alpha
Helix 8
AA8
A
186 200Right-handed alpha
Helix 9
AA9
A
257 277Right-handed alpha
Helix 10
AB1
A
285 293Right-handed alpha
Helix 11
AB2
B
31 44Right-handed alpha
Helix 12
AB3
B
77 89Right-handed alpha
Helix 13
AB4
B
99 101Right-handed 310
Helix 14
AB5
B
102 114Right-handed alpha
Helix 15
AB6
B
125 137Right-handed alpha
Helix 16
AB7
B
147 164Right-handed alpha
Helix 17
AB8
B
189 200Right-handed alpha
Helix 18
AB9
B
205 209Right-handed 310
Helix 19
AC1
B
257 277Right-handed alpha
Helix 20
AC2
B
285 293Right-handed alpha
Helix 21
AC3
C
31 44Right-handed alpha
Helix 22
AC4
C
77 89Right-handed alpha
Helix 23
AC5
C
99 101Right-handed 310
Helix 24
AC6
C
102 114Right-handed alpha
Helix 25
AC7
C
125 137Right-handed alpha
Helix 26
AC8
C
147 164Right-handed alpha
Helix 27
AC9
C
179 184Right-handed alpha
Helix 28
AD1
C
186 200Right-handed alpha
Helix 29
AD2
C
205 209Right-handed 310
Helix 30
AD3
C
257 277Right-handed alpha
Helix 31
AD4
C
285 293Right-handed alpha
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There are 11 sheets in PDB entry 5UA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
23 27parallel
Strand 3
A
92 96parallel
Strand 4
A
117 119parallel
Strand 5
A
140 142parallel
Strand 6
A
283 284parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
68 73parallel
Strand 3
A
62 65anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 212first strand
Strand 2
A
172 178parallel
Strand 3
A
233 240anti-parallel
Strand 4
A
247 254anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 220first strand
Strand 2
A
225 229anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
23 27parallel
Strand 3
B
92 96parallel
Strand 4
B
117 119parallel
Strand 5
B
140 142parallel
Strand 6
B
283 284parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
68 73parallel
Strand 3
B
62 65anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 212first strand
Strand 2
B
172 178parallel
Strand 3
B
233 240anti-parallel
Strand 4
B
246 254anti-parallel
Strand 5
C
246 254anti-parallel
Strand 6
C
233 240anti-parallel
Strand 7
C
172 178anti-parallel
Strand 8
C
210 212parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 220first strand
Strand 2
B
225 229anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 48first strand
Strand 2
C
23 27parallel
Strand 3
C
92 96parallel
Strand 4
C
117 119parallel
Strand 5
C
140 142parallel
Strand 6
C
283 284parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 53first strand
Strand 2
C
68 73parallel
Strand 3
C
62 65anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 220first strand
Strand 2
C
225 229anti-parallel
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