Analysis of interatomic Contacts of Structural Units in PDB entry:
5UC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UC0 entry

There are 2 chains in PDB entry 5UC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 38PHE 198
B
 ALA 38PHE 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5UC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 55Right-handed alpha
Helix 2
AA2
A
58 73Right-handed alpha
Helix 3
AA3
A
136 141Right-handed 310
Helix 4
AA4
A
175 181Right-handed alpha
Helix 5
AA5
A
182 184Right-handed 310
Helix 6
AA6
B
42 55Right-handed alpha
Helix 7
AA7
B
58 73Right-handed alpha
Helix 8
AA8
B
136 140Right-handed 310
Helix 9
AA9
B
175 182Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5UC0.

There are 22 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 174first strand
Strand 2
A
125 132anti-parallel
Strand 3
A
77 84anti-parallel
Strand 4
A
92 100anti-parallel
Strand 5
A
107 114anti-parallel
Strand 6
A
186 190anti-parallel
Strand 7
A
142 146anti-parallel
Strand 8
A
162 164anti-parallel
Strand 9
A
167 174anti-parallel
Strand 10
A
157 159anti-parallel
Strand 11
A
152 154anti-parallel
Strand 12
B
152 154anti-parallel
Strand 13
B
157 159anti-parallel
Strand 14
B
167 174anti-parallel
Strand 15
B
162 164anti-parallel
Strand 16
B
142 146anti-parallel
Strand 17
B
186 190anti-parallel
Strand 18
B
107 114anti-parallel
Strand 19
B
92 100anti-parallel
Strand 20
B
77 84anti-parallel
Strand 21
B
125 132anti-parallel
Strand 22
B
167 174anti-parallel
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