Analysis of interatomic Contacts of Structural Units in PDB entry:
5UCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UCV entry

There are 2 chains in PDB entry 5UCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ALA 201
B
 ASN 2ASP 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5UCV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 19Right-handed 310
Helix 2
AA2
A
35 45Right-handed alpha
Helix 3
AA3
A
85 103Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
A
143 147Right-handed 310
Helix 6
AA6
A
148 164Right-handed alpha
Helix 7
AA7
A
165 169Right-handed 310
Helix 8
AA8
A
184 199Right-handed alpha
Helix 9
AA9
B
3 7Right-handed 310
Helix 10
AB1
B
15 19Right-handed 310
Helix 11
AB2
B
32 45Right-handed alpha
Helix 12
AB3
B
68 70Right-handed 310
Helix 13
AB4
B
85 87Right-handed 310
Helix 14
AB5
B
88 103Right-handed alpha
Helix 15
AB6
B
120 132Right-handed alpha
Helix 16
AB7
B
143 147Right-handed 310
Helix 17
AB8
B
148 164Right-handed alpha
Helix 18
AB9
B
165 169Right-handed 310
Helix 19
AC1
B
184 200Right-handed alpha
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There are 2 sheets in PDB entry 5UCV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 13first strand
Strand 2
A
62 66anti-parallel
Strand 3
A
72 75anti-parallel
Strand 4
A
25 30parallel
Strand 5
A
106 114parallel
Strand 6
A
137 142parallel
Strand 7
A
172 176parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 13first strand
Strand 2
B
62 66anti-parallel
Strand 3
B
72 75anti-parallel
Strand 4
B
25 30parallel
Strand 5
B
106 114parallel
Strand 6
B
137 142parallel
Strand 7
B
172 176parallel
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