Analysis of interatomic Contacts of Structural Units in PDB entry:
5UE6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5UE6 entry

There are 9 chains in PDB entry 5UE6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 49	ALA 362
B	GLU 53	ALA 362
C	GLU 53	ALA 362
D	LEU 54	ALA 362
E	GLU 53	ALA 362
F	GLU 53	SER 359
G	THR 49	ALA 362
H	GLU 53	ALA 362
I	GLU 53	TYR 363

There are 56 helices in PDB entry 5UE6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	50	54	Right-handed 310
Helix 2	AA2	A	143	148	Right-handed 310
Helix 3	AA3	A	179	186	Right-handed alpha
Helix 4	AA4	A	229	236	Right-handed alpha
Helix 5	AA5	A	251	255	Right-handed 310
Helix 6	AA6	A	292	294	Right-handed 310
Helix 7	AA7	A	330	338	Right-handed alpha
Helix 8	AA8	B	143	148	Right-handed 310
Helix 9	AA9	B	179	186	Right-handed alpha
Helix 10	AB1	B	229	235	Right-handed alpha
Helix 11	AB2	B	251	255	Right-handed 310
Helix 12	AB3	B	292	294	Right-handed 310
Helix 13	AB4	B	331	338	Right-handed alpha
Helix 14	AB5	C	143	148	Right-handed 310
Helix 15	AB6	C	179	186	Right-handed alpha
Helix 16	AB7	C	229	236	Right-handed alpha
Helix 17	AB8	C	251	255	Right-handed 310
Helix 18	AB9	C	292	294	Right-handed 310
Helix 19	AC1	C	331	338	Right-handed alpha
Helix 20	AC2	D	143	148	Right-handed 310
Helix 21	AC3	D	179	186	Right-handed alpha
Helix 22	AC4	D	229	236	Right-handed alpha
Helix 23	AC5	D	251	255	Right-handed 310
Helix 24	AC6	D	292	294	Right-handed 310
Helix 25	AC7	D	331	338	Right-handed alpha
Helix 26	AC8	E	143	148	Right-handed 310
Helix 27	AC9	E	179	186	Right-handed alpha
Helix 28	AD1	E	229	235	Right-handed alpha
Helix 29	AD2	E	251	255	Right-handed 310
Helix 30	AD3	E	292	294	Right-handed 310
Helix 31	AD4	E	331	338	Right-handed alpha
Helix 32	AD5	F	143	148	Right-handed 310
Helix 33	AD6	F	179	186	Right-handed alpha
Helix 34	AD7	F	229	236	Right-handed alpha
Helix 35	AD8	F	251	255	Right-handed 310
Helix 36	AD9	F	292	294	Right-handed 310
Helix 37	AE1	F	330	338	Right-handed alpha
Helix 38	AE2	G	50	54	Right-handed 310
Helix 39	AE3	G	143	148	Right-handed 310
Helix 40	AE4	G	179	186	Right-handed alpha
Helix 41	AE5	G	229	236	Right-handed alpha
Helix 42	AE6	G	251	255	Right-handed 310
Helix 43	AE7	G	292	294	Right-handed 310
Helix 44	AE8	G	331	338	Right-handed alpha
Helix 45	AE9	H	143	148	Right-handed 310
Helix 46	AF1	H	179	186	Right-handed alpha
Helix 47	AF2	H	229	236	Right-handed alpha
Helix 48	AF3	H	251	255	Right-handed 310
Helix 49	AF4	H	292	294	Right-handed 310
Helix 50	AF5	H	331	338	Right-handed alpha
Helix 51	AF6	I	143	152	Right-handed 310
Helix 52	AF7	I	179	186	Right-handed alpha
Helix 53	AF8	I	229	236	Right-handed alpha
Helix 54	AF9	I	251	255	Right-handed 310
Helix 55	AG1	I	292	294	Right-handed 310
Helix 56	AG2	I	331	338	Right-handed alpha

There are 45 sheets in PDB entry 5UE6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	78	93	parallel
Strand 3	A	96	103	anti-parallel
Strand 4	A	224	226	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	78	93	parallel
Strand 3	A	119	126	parallel
Strand 4	A	158	164	anti-parallel
Strand 5	B	359	361	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	115	first strand
Strand 2	A	189	195	parallel
Strand 3	A	169	174	anti-parallel
Strand 4	A	137	138	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	243	first strand
Strand 2	A	205	214	anti-parallel
Strand 3	A	263	272	parallel
Strand 4	A	310	317	anti-parallel
Strand 5	A	288	290	anti-parallel
Strand 6	A	297	298	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	259	first strand
Strand 2	A	340	346	parallel
Strand 3	A	322	328	anti-parallel
Strand 4	A	277	282	anti-parallel
Strand 5	A	304	306	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	361	first strand
Strand 2	C	158	164	anti-parallel
Strand 3	C	119	126	anti-parallel
Strand 4	C	78	93	parallel
Strand 5	C	56	58	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	361	first strand
Strand 2	C	158	164	anti-parallel
Strand 3	C	119	126	anti-parallel
Strand 4	C	78	93	parallel
Strand 5	C	96	103	anti-parallel
Strand 6	C	224	226	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	58	first strand
Strand 2	B	78	93	parallel
Strand 3	B	96	103	anti-parallel
Strand 4	B	224	226	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	58	first strand
Strand 2	B	78	93	parallel
Strand 3	B	119	126	parallel
Strand 4	B	158	164	anti-parallel
Strand 5	C	359	361	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	115	first strand
Strand 2	B	189	195	parallel
Strand 3	B	169	174	anti-parallel
Strand 4	B	137	138	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	243	first strand
Strand 2	B	205	214	anti-parallel
Strand 3	B	263	272	parallel
Strand 4	B	310	317	anti-parallel
Strand 5	B	288	290	anti-parallel
Strand 6	B	297	298	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	259	first strand
Strand 2	B	340	346	parallel
Strand 3	B	322	328	anti-parallel
Strand 4	B	277	282	anti-parallel
Strand 5	B	304	306	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	115	first strand
Strand 2	C	189	195	parallel
Strand 3	C	169	174	anti-parallel
Strand 4	C	137	138	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	243	first strand
Strand 2	C	205	214	anti-parallel
Strand 3	C	263	272	parallel
Strand 4	C	310	317	anti-parallel
Strand 5	C	288	290	anti-parallel
Strand 6	C	297	298	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	259	first strand
Strand 2	C	340	346	parallel
Strand 3	C	322	328	anti-parallel
Strand 4	C	277	282	anti-parallel
Strand 5	C	304	306	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	78	93	parallel
Strand 3	D	96	103	anti-parallel
Strand 4	D	224	225	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	78	93	parallel
Strand 3	D	119	126	parallel
Strand 4	D	158	164	anti-parallel
Strand 5	E	359	361	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	112	115	first strand
Strand 2	D	189	195	parallel
Strand 3	D	169	174	anti-parallel
Strand 4	D	137	138	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	243	first strand
Strand 2	D	205	214	anti-parallel
Strand 3	D	263	272	parallel
Strand 4	D	310	317	anti-parallel
Strand 5	D	288	290	anti-parallel
Strand 6	D	297	298	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	259	first strand
Strand 2	D	340	346	parallel
Strand 3	D	322	328	anti-parallel
Strand 4	D	277	282	anti-parallel
Strand 5	D	304	306	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	359	361	first strand
Strand 2	F	158	164	anti-parallel
Strand 3	F	119	126	anti-parallel
Strand 4	F	78	93	parallel
Strand 5	F	56	58	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	359	361	first strand
Strand 2	F	158	164	anti-parallel
Strand 3	F	119	126	anti-parallel
Strand 4	F	78	93	parallel
Strand 5	F	96	103	anti-parallel
Strand 6	F	224	225	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	78	93	parallel
Strand 3	E	119	126	parallel
Strand 4	E	158	164	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	78	93	parallel
Strand 3	E	96	103	anti-parallel
Strand 4	E	224	225	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	112	115	first strand
Strand 2	E	189	195	parallel
Strand 3	E	169	174	anti-parallel
Strand 4	E	137	138	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	243	first strand
Strand 2	E	205	214	anti-parallel
Strand 3	E	263	272	parallel
Strand 4	E	310	317	anti-parallel
Strand 5	E	288	290	anti-parallel
Strand 6	E	297	298	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	256	259	first strand
Strand 2	E	340	346	parallel
Strand 3	E	322	328	anti-parallel
Strand 4	E	277	282	anti-parallel
Strand 5	E	304	306	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	112	115	first strand
Strand 2	F	189	195	parallel
Strand 3	F	169	174	anti-parallel
Strand 4	F	137	138	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	243	first strand
Strand 2	F	205	214	anti-parallel
Strand 3	F	263	272	parallel
Strand 4	F	310	317	anti-parallel
Strand 5	F	288	290	anti-parallel
Strand 6	F	297	298	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	256	259	first strand
Strand 2	F	340	346	parallel
Strand 3	F	322	328	anti-parallel
Strand 4	F	277	282	anti-parallel
Strand 5	F	304	306	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	58	first strand
Strand 2	G	78	93	parallel
Strand 3	G	96	103	anti-parallel
Strand 4	G	224	225	parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	58	first strand
Strand 2	G	78	93	parallel
Strand 3	G	119	126	parallel
Strand 4	G	158	164	anti-parallel
Strand 5	H	359	361	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	112	115	first strand
Strand 2	G	189	195	parallel
Strand 3	G	169	174	anti-parallel
Strand 4	G	137	138	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	243	first strand
Strand 2	G	205	214	anti-parallel
Strand 3	G	263	272	parallel
Strand 4	G	310	317	anti-parallel
Strand 5	G	288	290	anti-parallel
Strand 6	G	297	298	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	259	first strand
Strand 2	G	340	346	parallel
Strand 3	G	322	328	anti-parallel
Strand 4	G	277	282	anti-parallel
Strand 5	G	304	306	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	359	361	first strand
Strand 2	I	158	164	anti-parallel
Strand 3	I	119	126	anti-parallel
Strand 4	I	78	93	parallel
Strand 5	I	56	58	parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	359	361	first strand
Strand 2	I	158	164	anti-parallel
Strand 3	I	119	126	anti-parallel
Strand 4	I	78	93	parallel
Strand 5	I	96	103	anti-parallel
Strand 6	I	224	225	parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	58	first strand
Strand 2	H	78	93	parallel
Strand 3	H	96	103	anti-parallel
Strand 4	H	224	226	parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	58	first strand
Strand 2	H	78	93	parallel
Strand 3	H	119	126	parallel
Strand 4	H	157	164	anti-parallel
Strand 5	I	359	362	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	112	115	first strand
Strand 2	H	189	195	parallel
Strand 3	H	169	174	anti-parallel
Strand 4	H	137	138	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	240	243	first strand
Strand 2	H	205	214	anti-parallel
Strand 3	H	263	272	parallel
Strand 4	H	310	317	anti-parallel
Strand 5	H	288	290	anti-parallel
Strand 6	H	297	298	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	256	259	first strand
Strand 2	H	340	346	parallel
Strand 3	H	322	328	anti-parallel
Strand 4	H	277	282	anti-parallel
Strand 5	H	304	306	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	112	115	first strand
Strand 2	I	189	195	parallel
Strand 3	I	169	174	anti-parallel
Strand 4	I	137	138	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	240	243	first strand
Strand 2	I	205	214	anti-parallel
Strand 3	I	263	272	parallel
Strand 4	I	310	317	anti-parallel
Strand 5	I	288	290	anti-parallel
Strand 6	I	297	298	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	256	259	first strand
Strand 2	I	340	346	parallel
Strand 3	I	322	328	anti-parallel
Strand 4	I	277	282	anti-parallel
Strand 5	I	304	306	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5UE6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5UE6