Analysis of interatomic Contacts of Structural Units in PDB entry:
5UE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UE7 entry

There are 2 chains in PDB entry 5UE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLN 252
B
 SER 2GLN 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5UE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 43Right-handed alpha
Helix 2
AA2
A
52 61Right-handed alpha
Helix 3
AA3
A
63 67Right-handed 310
Helix 4
AA4
A
74 76Right-handed 310
Helix 5
AA5
A
90 96Right-handed alpha
Helix 6
AA6
A
96 114Right-handed alpha
Helix 7
AA7
A
141 156Right-handed alpha
Helix 8
AA8
A
156 169Right-handed alpha
Helix 9
AA9
A
192 204Right-handed 310
Helix 10
AB1
A
221 226Right-handed alpha
Helix 11
AB2
A
237 249Right-handed alpha
Helix 12
AB3
B
29 43Right-handed alpha
Helix 13
AB4
B
52 61Right-handed alpha
Helix 14
AB5
B
63 68Right-handed alpha
Helix 15
AB6
B
74 76Right-handed 310
Helix 16
AB7
B
90 96Right-handed alpha
Helix 17
AB8
B
96 114Right-handed alpha
Helix 18
AB9
B
141 156Right-handed alpha
Helix 19
AC1
B
156 169Right-handed alpha
Helix 20
AC2
B
192 201Right-handed 310
Helix 21
AC3
B
221 227Right-handed alpha
Helix 22
AC4
B
237 249Right-handed alpha
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There are 4 sheets in PDB entry 5UE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 88first strand
Strand 2
A
78 81anti-parallel
Strand 3
A
70 73anti-parallel
Strand 4
A
44 48parallel
Strand 5
A
11 16parallel
Strand 6
A
207 212parallel
Strand 7
A
231 234parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
131 133anti-parallel
Strand 3
A
183 188anti-parallel
Strand 4
A
174 179anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 88first strand
Strand 2
B
78 81anti-parallel
Strand 3
B
70 73anti-parallel
Strand 4
B
44 48parallel
Strand 5
B
11 16parallel
Strand 6
B
207 212parallel
Strand 7
B
231 234parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
131 133anti-parallel
Strand 3
B
183 188anti-parallel
Strand 4
B
174 179anti-parallel
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