Analysis of interatomic Contacts of Structural Units in PDB entry:
5UF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UF5 entry

There are 2 chains in PDB entry 5UF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 16LEU 273
B
 GLU 16LEU 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5UF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 37Right-handed alpha
Helix 2
AA2
A
42 49Right-handed alpha
Helix 3
AA3
A
49 57Right-handed alpha
Helix 4
AA4
A
61 71Right-handed alpha
Helix 5
AA5
A
77 98Right-handed alpha
Helix 6
AA6
A
104 123Right-handed alpha
Helix 7
AA7
A
125 141Right-handed alpha
Helix 8
AA8
A
146 167Right-handed alpha
Helix 9
AA9
A
172 188Right-handed alpha
Helix 10
AB1
A
192 206Right-handed alpha
Helix 11
AB2
A
218 234Right-handed alpha
Helix 12
AB3
A
239 250Right-handed alpha
Helix 13
AB4
A
256 271Right-handed alpha
Helix 14
AB5
B
18 37Right-handed alpha
Helix 15
AB6
B
42 49Right-handed alpha
Helix 16
AB7
B
49 58Right-handed alpha
Helix 17
AB8
B
61 71Right-handed alpha
Helix 18
AB9
B
77 98Right-handed alpha
Helix 19
AC1
B
104 123Right-handed alpha
Helix 20
AC2
B
124 140Right-handed alpha
Helix 21
AC3
B
146 167Right-handed alpha
Helix 22
AC4
B
172 188Right-handed alpha
Helix 23
AC5
B
192 206Right-handed alpha
Helix 24
AC6
B
218 234Right-handed alpha
Helix 25
AC7
B
235 237Right-handed 310
Helix 26
AC8
B
239 249Right-handed alpha
Helix 27
AC9
B
250 252Right-handed 310
Helix 28
AD1
B
256 272Right-handed alpha
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There are no sheets in PDB entry 5UF5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il