Analysis of interatomic Contacts of Structural Units in PDB entry:
5UFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UFC entry

There are 3 chains in PDB entry 5UFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 5CYS 244
B
 CYS 5CYS 244
C
 CYS 5CYS 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5UFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 150Right-handed 310
Helix 2
AA2
A
191 193Right-handed 310
Helix 3
AA3
A
194 204Right-handed alpha
Helix 4
AA4
A
219 222Right-handed 310
Helix 5
AA5
A
230 234Right-handed 310
Helix 6
AA6
A
235 239Right-handed 310
Helix 7
AA7
B
146 150Right-handed 310
Helix 8
AA8
B
191 193Right-handed 310
Helix 9
AA9
B
194 204Right-handed alpha
Helix 10
AB1
B
230 234Right-handed 310
Helix 11
AB2
B
235 239Right-handed 310
Helix 12
AB3
C
146 150Right-handed 310
Helix 13
AB4
C
191 193Right-handed 310
Helix 14
AB5
C
194 204Right-handed alpha
Helix 15
AB6
C
230 234Right-handed 310
Helix 16
AB7
C
235 239Right-handed 310
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There are 3 sheets in PDB entry 5UFC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
15 17anti-parallel
Strand 3
A
36 38parallel
Strand 4
A
60 62parallel
Strand 5
A
84 86parallel
Strand 6
A
108 110parallel
Strand 7
A
132 134parallel
Strand 8
A
155 157parallel
Strand 9
A
179 181parallel
Strand 10
A
208 211parallel
Strand 11
A
215 217anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
15 17anti-parallel
Strand 3
B
36 38parallel
Strand 4
B
60 62parallel
Strand 5
B
84 86parallel
Strand 6
B
108 110parallel
Strand 7
B
132 134parallel
Strand 8
B
155 157parallel
Strand 9
B
179 181parallel
Strand 10
B
208 211parallel
Strand 11
B
215 217anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 11first strand
Strand 2
C
15 17anti-parallel
Strand 3
C
36 38parallel
Strand 4
C
60 62parallel
Strand 5
C
84 86parallel
Strand 6
C
108 110parallel
Strand 7
C
132 134parallel
Strand 8
C
155 157parallel
Strand 9
C
179 181parallel
Strand 10
C
208 211parallel
Strand 11
C
215 217anti-parallel
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