Analysis of interatomic Contacts of Structural Units in PDB entry:
5UFH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UFH entry

There are 2 chains in PDB entry 5UFH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 63VAL 86
A
 ALA 88LEU 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5UFH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 91Right-handed alpha
Helix 2
AA2
A
105 114Right-handed alpha
Helix 3
AA3
A
115 117Right-handed 310
Helix 4
AA4
A
161 176Right-handed alpha
Helix 5
AA5
A
187 190Right-handed 310
Helix 6
AA6
A
191 198Right-handed alpha
Helix 7
AA7
A
201 217Right-handed alpha
Helix 8
AA8
A
222 224Right-handed 310
Helix 9
AA9
A
233 247Right-handed alpha
Helix 10
AB1
A
258 272Right-handed alpha
Helix 11
AB2
A
289 294Right-handed alpha
Helix 12
AB3
A
304 321Right-handed alpha
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There are 2 sheets in PDB entry 5UFH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 99first strand
Strand 2
A
64 69parallel
Strand 3
A
121 125parallel
Strand 4
A
143 146parallel
Strand 5
A
156 159parallel
Strand 6
A
329 331parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
181 184parallel
Strand 3
A
253 256parallel
Strand 4
A
281 285parallel
Strand 5
A
299 302parallel
Strand 6
A
335 337anti-parallel
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