Analysis of interatomic Contacts of Structural Units in PDB entry:
5UFK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UFK entry

There are 6 chains in PDB entry 5UFK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLY 24
A
 ILE 26VAL 128
A
 LEU 130PHE 179
A
 LEU 181PHE 200
A
 GLY 202THR 256
A
 THR 258ALA 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5UFK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 37Right-handed alpha
Helix 2
AA2
A
42 49Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
61 71Right-handed alpha
Helix 5
AA5
A
77 99Right-handed alpha
Helix 6
AA6
A
104 117Right-handed alpha
Helix 7
AA7
A
120 123Right-handed 310
Helix 8
AA8
A
124 142Right-handed alpha
Helix 9
AA9
A
146 167Right-handed alpha
Helix 10
AB1
A
172 188Right-handed alpha
Helix 11
AB2
A
192 207Right-handed alpha
Helix 12
AB3
A
218 234Right-handed alpha
Helix 13
AB4
A
235 237Right-handed 310
Helix 14
AB5
A
239 250Right-handed alpha
Helix 15
AB6
A
256 271Right-handed alpha
Helix 16
AB7
A
272 274Right-handed 310
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There are no sheets in PDB entry 5UFK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il