Analysis of interatomic Contacts of Structural Units in PDB entry:
5UH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UH0 entry

There are 2 chains in PDB entry 5UH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 33LEU 265
B
 ASN 33LEU 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5UH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 43Right-handed alpha
Helix 2
AA2
A
65 79Right-handed alpha
Helix 3
AA3
A
89 99Right-handed alpha
Helix 4
AA4
A
112 117Right-handed 310
Helix 5
AA5
A
157 169Right-handed alpha
Helix 6
AA6
A
183 193Right-handed alpha
Helix 7
AA7
A
203 211Right-handed alpha
Helix 8
AA8
A
238 254Right-handed alpha
Helix 9
AA9
A
255 264Right-handed alpha
Helix 10
AB1
B
34 43Right-handed alpha
Helix 11
AB2
B
65 79Right-handed alpha
Helix 12
AB3
B
89 99Right-handed alpha
Helix 13
AB4
B
112 117Right-handed 310
Helix 14
AB5
B
157 169Right-handed alpha
Helix 15
AB6
B
183 193Right-handed alpha
Helix 16
AB7
B
203 211Right-handed alpha
Helix 17
AB8
B
238 253Right-handed alpha
Helix 18
AB9
B
255 264Right-handed alpha
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There are 7 sheets in PDB entry 5UH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 87first strand
Strand 2
A
44 50parallel
Strand 3
A
104 105parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 128first strand
Strand 2
A
226 233anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
130 135anti-parallel
Strand 3
A
216 221anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
176 179parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 87first strand
Strand 2
B
44 50parallel
Strand 3
B
104 105parallel
Strand 4
B
226 233anti-parallel
Strand 5
B
119 128anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 202first strand
Strand 2
B
130 135anti-parallel
Strand 3
B
216 221anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
176 179parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il