Analysis of interatomic Contacts of Structural Units in PDB entry:
5UI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UI5 entry

There are 6 chains in PDB entry 5UI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 G 1 G 31
B
 C 34 G 63
I
 GLU 73ILE 398
N
 G 1 G 31
O
 C 34 G 63
V
 GLU 73ARG 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5UI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
73 85Right-handed alpha
Helix 2
AA2
I
87 97Right-handed alpha
Helix 3
AA3
I
109 118Right-handed alpha
Helix 4
AA4
I
120 132Right-handed alpha
Helix 5
AA5
I
143 155Right-handed alpha
Helix 6
AA6
I
159 172Right-handed alpha
Helix 7
AA7
I
177 184Right-handed alpha
Helix 8
AA8
I
185 187Right-handed 310
Helix 9
AA9
I
222 225Right-handed 310
Helix 10
AB1
I
230 236Right-handed alpha
Helix 11
AB2
I
243 285Right-handed alpha
Helix 12
AB3
I
293 299Right-handed alpha
Helix 13
AB4
I
304 315Right-handed alpha
Helix 14
AB5
I
339 352Right-handed alpha
Helix 15
AB6
I
362 372Right-handed alpha
Helix 16
AB7
I
377 388Right-handed alpha
Helix 17
AB8
V
74 85Right-handed alpha
Helix 18
AB9
V
87 97Right-handed alpha
Helix 19
AC1
V
109 118Right-handed alpha
Helix 20
AC2
V
120 132Right-handed alpha
Helix 21
AC3
V
143 155Right-handed alpha
Helix 22
AC4
V
159 173Right-handed alpha
Helix 23
AC5
V
177 184Right-handed alpha
Helix 24
AC6
V
185 187Right-handed 310
Helix 25
AC7
V
222 225Right-handed 310
Helix 26
AC8
V
230 236Right-handed alpha
Helix 27
AC9
V
237 239Right-handed 310
Helix 28
AD1
V
240 241Right-handed 310
Helix 29
AD2
V
242 285Right-handed alpha
Helix 30
AD3
V
293 299Right-handed alpha
Helix 31
AD4
V
304 315Right-handed alpha
Helix 32
AD5
V
327 330Right-handed 310
Helix 33
AD6
V
339 354Right-handed alpha
Helix 34
AD7
V
361 373Right-handed alpha
Helix 35
AD8
V
377 388Right-handed alpha
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There are 4 sheets in PDB entry 5UI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
207 210first strand
Strand 2
I
217 220anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
317 318first strand
Strand 2
I
323 324anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
207 210first strand
Strand 2
V
217 220anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
316 318first strand
Strand 2
V
323 325anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il