Analysis of interatomic Contacts of Structural Units in PDB entry:
5UIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UIW entry

There are 2 chains in PDB entry 5UIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16ILE 316
B
 GLY 1MET 67
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5UIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 58Right-handed alpha
Helix 2
AA2
A
63 92Right-handed alpha
Helix 3
AA3
A
96 132Right-handed alpha
Helix 4
AA4
A
135 140Right-handed alpha
Helix 5
AA5
A
141 166Right-handed alpha
Helix 6
AA6
A
183 185Right-handed 310
Helix 7
AA7
A
186 203Right-handed alpha
Helix 8
AA8
A
203 222Right-handed alpha
Helix 9
AA9
A
1019 1023Right-handed 310
Helix 10
AB1
A
1029 1033Right-handed 310
Helix 11
AB2
A
1045 1047Right-handed 310
Helix 12
AB3
A
1052 260Right-handed alpha
Helix 13
AB4
A
268 289Right-handed alpha
Helix 14
AB5
A
291 300Right-handed alpha
Helix 15
AB6
A
301 314Right-handed alpha
Helix 16
AB7
B
4 8Right-handed 310
Helix 17
AB8
B
20 22Right-handed 310
Helix 18
AB9
B
55 67Right-handed alpha
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There are 3 sheets in PDB entry 5UIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
175 180anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1012 1013first strand
Strand 2
A
1004 1006anti-parallel
Strand 3
A
1049 1051anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 29first strand
Strand 2
B
39 43anti-parallel
Strand 3
B
48 51anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il