Analysis of interatomic Contacts of Structural Units in PDB entry:
5UIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UIZ entry

There are 2 chains in PDB entry 5UIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 37VAL 222
B
 HIS 37VAL 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5UIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 55Right-handed alpha
Helix 2
AA2
A
62 67Right-handed alpha
Helix 3
AA3
A
67 77Right-handed alpha
Helix 4
AA4
A
78 83Right-handed alpha
Helix 5
AA5
A
95 100Right-handed alpha
Helix 6
AA6
A
110 115Right-handed alpha
Helix 7
AA7
A
116 121Right-handed 310
Helix 8
AA8
B
45 55Right-handed alpha
Helix 9
AA9
B
62 67Right-handed alpha
Helix 10
AB1
B
67 77Right-handed alpha
Helix 11
AB2
B
78 83Right-handed alpha
Helix 12
AB3
B
84 86Right-handed 310
Helix 13
AB4
B
95 100Right-handed alpha
Helix 14
AB5
B
110 115Right-handed alpha
Helix 15
AB6
B
116 121Right-handed 310
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There are 6 sheets in PDB entry 5UIZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
133 140anti-parallel
Strand 3
A
184 190anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
211 221anti-parallel
Strand 3
A
128 130parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
211 221anti-parallel
Strand 3
A
196 206anti-parallel
Strand 4
A
146 154anti-parallel
Strand 5
A
170 175anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
133 140anti-parallel
Strand 3
B
184 190anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
212 221anti-parallel
Strand 3
B
128 130parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
212 221anti-parallel
Strand 3
B
196 206anti-parallel
Strand 4
B
146 154anti-parallel
Strand 5
B
170 175anti-parallel
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