Analysis of interatomic Contacts of Structural Units in PDB entry:
5UJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UJ9 entry

There is 1 chain in PDB entry 5UJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 UNK 31GLN 1516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5UJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 43Right-handed alpha
Helix 2
AA2
A
46 54Right-handed alpha
Helix 3
AA3
A
76 99Right-handed alpha
Helix 4
AA4
A
105 131Right-handed alpha
Helix 5
AA5
A
137 149Right-handed alpha
Helix 6
AA6
A
151 158Right-handed alpha
Helix 7
AA7
A
172 194Right-handed alpha
Helix 8
AA8
A
214 221Right-handed alpha
Helix 9
AA9
A
224 234Right-handed alpha
Helix 10
AB1
A
249 267Right-handed alpha
Helix 11
AB2
A
314 320Right-handed 310
Helix 12
AB3
A
321 326Right-handed alpha
Helix 13
AB4
A
326 355Right-handed alpha
Helix 14
AB5
A
359 410Right-handed alpha
Helix 15
AB6
A
411 419Right-handed alpha
Helix 16
AB7
A
419 441Right-handed alpha
Helix 17
AB8
A
442 463Right-handed alpha
Helix 18
AB9
A
466 511Right-handed alpha
Helix 19
AC1
A
511 518Right-handed alpha
Helix 20
AC2
A
520 555Right-handed alpha
Helix 21
AC3
A
555 572Right-handed alpha
Helix 22
AC4
A
578 621Right-handed alpha
Helix 23
AC5
A
683 691Right-handed alpha
Helix 24
AC6
A
721 728Right-handed alpha
Helix 25
AC7
A
733 745Right-handed alpha
Helix 26
AC8
A
746 752Right-handed alpha
Helix 27
AC9
A
769 785Right-handed alpha
Helix 28
AD1
A
799 810Right-handed alpha
Helix 29
AD2
A
831 835Right-handed 310
Helix 30
AD3
A
851 857Right-handed alpha
Helix 31
AD4
A
860 867Right-handed alpha
Helix 32
AD5
A
958 970Right-handed alpha
Helix 33
AD6
A
970 1000Right-handed alpha
Helix 34
AD7
A
1010 1057Right-handed alpha
Helix 35
AD8
A
1059 1066Right-handed alpha
Helix 36
AD9
A
1067 1111Right-handed alpha
Helix 37
AE1
A
1112 1116Right-handed 310
Helix 38
AE2
A
1117 1147Right-handed alpha
Helix 39
AE3
A
1147 1160Right-handed alpha
Helix 40
AE4
A
1160 1168Right-handed alpha
Helix 41
AE5
A
1169 1220Right-handed alpha
Helix 42
AE6
A
1225 1257Right-handed alpha
Helix 43
AE7
A
1257 1264Right-handed alpha
Helix 44
AE8
A
1332 1341Right-handed alpha
Helix 45
AE9
A
1361 1369Right-handed alpha
Helix 46
AF1
A
1383 1388Right-handed alpha
Helix 47
AF2
A
1394 1405Right-handed alpha
Helix 48
AF3
A
1407 1414Right-handed alpha
Helix 49
AF4
A
1430 1446Right-handed alpha
Helix 50
AF5
A
1462 1474Right-handed alpha
Helix 51
AF6
A
1486 1491Right-handed alpha
Helix 52
AF7
A
1509 1516Right-handed alpha
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There are 5 sheets in PDB entry 5UJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 668first strand
Strand 2
A
644 652anti-parallel
Strand 3
A
696 704anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 711first strand
Strand 2
A
788 792parallel
Strand 3
A
822 825parallel
Strand 4
A
673 677parallel
Strand 5
A
837 841parallel
Strand 6
A
846 848anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1312 1316first strand
Strand 2
A
1292 1297anti-parallel
Strand 3
A
1349 1352anti-parallel
Strand 4
A
1355 1356anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1449 1453first strand
Strand 2
A
1479 1483parallel
Strand 3
A
1321 1325parallel
Strand 4
A
1495 1499parallel
Strand 5
A
1504 1507anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1381 1382first strand
Strand 2
A
1421 1422anti-parallel
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