Analysis of interatomic Contacts of Structural Units in PDB entry:
5ULM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ULM entry

There are 2 chains in PDB entry 5ULM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 272GLU 655
B
 PHE 272GLU 655
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5ULM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
272 287Right-handed alpha
Helix 2
AA2
A
288 304Right-handed alpha
Helix 3
AA3
A
310 324Right-handed alpha
Helix 4
AA4
A
326 340Right-handed alpha
Helix 5
AA5
A
344 347Right-handed 310
Helix 6
AA6
A
348 363Right-handed alpha
Helix 7
AA7
A
366 380Right-handed alpha
Helix 8
AA8
A
386 404Right-handed alpha
Helix 9
AA9
A
408 426Right-handed alpha
Helix 10
AB1
A
428 442Right-handed alpha
Helix 11
AB2
A
451 467Right-handed alpha
Helix 12
AB3
A
468 472Right-handed 310
Helix 13
AB4
A
474 488Right-handed alpha
Helix 14
AB5
A
490 504Right-handed alpha
Helix 15
AB6
A
507 525Right-handed alpha
Helix 16
AB7
A
535 549Right-handed alpha
Helix 17
AB8
A
639 655Right-handed alpha
Helix 18
AB9
B
273 287Right-handed alpha
Helix 19
AC1
B
288 304Right-handed alpha
Helix 20
AC2
B
310 323Right-handed alpha
Helix 21
AC3
B
326 340Right-handed alpha
Helix 22
AC4
B
344 347Right-handed 310
Helix 23
AC5
B
348 363Right-handed alpha
Helix 24
AC6
B
366 380Right-handed alpha
Helix 25
AC7
B
386 404Right-handed alpha
Helix 26
AC8
B
408 426Right-handed alpha
Helix 27
AC9
B
428 442Right-handed alpha
Helix 28
AD1
B
451 467Right-handed alpha
Helix 29
AD2
B
468 472Right-handed 310
Helix 30
AD3
B
474 488Right-handed alpha
Helix 31
AD4
B
490 504Right-handed alpha
Helix 32
AD5
B
507 525Right-handed alpha
Helix 33
AD6
B
535 549Right-handed alpha
Helix 34
AD7
B
639 655Right-handed alpha
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There are 2 sheets in PDB entry 5ULM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 605first strand
Strand 2
A
585 590anti-parallel
Strand 3
A
570 578anti-parallel
Strand 4
A
559 564anti-parallel
Strand 5
A
633 636anti-parallel
Strand 6
A
621 626anti-parallel
Strand 7
A
609 614anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
601 605first strand
Strand 2
B
585 590anti-parallel
Strand 3
B
570 578anti-parallel
Strand 4
B
559 564anti-parallel
Strand 5
B
633 636anti-parallel
Strand 6
B
621 626anti-parallel
Strand 7
B
609 614anti-parallel
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