Analysis of interatomic Contacts of Structural Units in PDB entry:
5UM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UM0 entry

There are 4 chains in PDB entry 5UM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2LEU 227
B
 HIS -2LEU 227
C
 HIS -2LEU 227
D
 HIS 0LEU 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5UM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 17Right-handed alpha
Helix 2
AA2
A
28 45Right-handed alpha
Helix 3
AA3
A
57 71Right-handed alpha
Helix 4
AA4
A
82 85Right-handed 310
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
105 114Right-handed alpha
Helix 8
AA8
A
130 138Right-handed 310
Helix 9
AA9
A
141 145Right-handed 310
Helix 10
AB1
A
150 165Right-handed alpha
Helix 11
AB2
A
165 172Right-handed alpha
Helix 12
AB3
A
181 194Right-handed alpha
Helix 13
AB4
A
198 203Right-handed 310
Helix 14
AB5
B
28 45Right-handed alpha
Helix 15
AB6
B
57 71Right-handed alpha
Helix 16
AB7
B
82 85Right-handed 310
Helix 17
AB8
B
89 93Right-handed 310
Helix 18
AB9
B
96 105Right-handed alpha
Helix 19
AC1
B
105 115Right-handed alpha
Helix 20
AC2
B
130 138Right-handed 310
Helix 21
AC3
B
141 145Right-handed 310
Helix 22
AC4
B
150 165Right-handed alpha
Helix 23
AC5
B
165 172Right-handed alpha
Helix 24
AC6
B
181 194Right-handed alpha
Helix 25
AC7
B
196 201Right-handed alpha
Helix 26
AC8
C
11 16Right-handed alpha
Helix 27
AC9
C
28 45Right-handed alpha
Helix 28
AD1
C
57 71Right-handed alpha
Helix 29
AD2
C
82 85Right-handed 310
Helix 30
AD3
C
89 93Right-handed 310
Helix 31
AD4
C
96 105Right-handed alpha
Helix 32
AD5
C
105 115Right-handed alpha
Helix 33
AD6
C
130 138Right-handed 310
Helix 34
AD7
C
141 145Right-handed 310
Helix 35
AD8
C
150 165Right-handed alpha
Helix 36
AD9
C
165 172Right-handed alpha
Helix 37
AE1
C
181 194Right-handed alpha
Helix 38
AE2
C
196 201Right-handed alpha
Helix 39
AE3
D
11 16Right-handed alpha
Helix 40
AE4
D
28 45Right-handed alpha
Helix 41
AE5
D
57 71Right-handed alpha
Helix 42
AE6
D
82 85Right-handed 310
Helix 43
AE7
D
89 93Right-handed 310
Helix 44
AE8
D
96 115Right-handed alpha
Helix 45
AE9
D
130 138Right-handed 310
Helix 46
AF1
D
141 145Right-handed 310
Helix 47
AF2
D
150 165Right-handed alpha
Helix 48
AF3
D
165 172Right-handed alpha
Helix 49
AF4
D
181 194Right-handed alpha
Helix 50
AF5
D
196 201Right-handed alpha
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There are 4 sheets in PDB entry 5UM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
51 54parallel
Strand 3
A
176 180parallel
Strand 4
A
1 7parallel
Strand 5
A
211 215anti-parallel
Strand 6
A
221 226anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
51 54parallel
Strand 3
B
176 180parallel
Strand 4
B
1 7parallel
Strand 5
B
211 215anti-parallel
Strand 6
B
221 226anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 80first strand
Strand 2
C
51 54parallel
Strand 3
C
176 180parallel
Strand 4
C
1 7parallel
Strand 5
C
211 215anti-parallel
Strand 6
C
221 226anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 80first strand
Strand 2
D
51 54parallel
Strand 3
D
176 180parallel
Strand 4
D
1 7parallel
Strand 5
D
211 215anti-parallel
Strand 6
D
221 226anti-parallel
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